Salvia miltiorrhiza (redroot sage): 130997880
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Entry
130997880 CDS
T09291
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38 isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
smil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130997880
03015 mRNA surveillance pathway
130997880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
130997880
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130997880
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130997880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130997880
NCBI-ProteinID:
XP_057779295
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All DBs
Position
8:complement(34422845..34427363)
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AA seq
496 aa
AA seq
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MADNESTDSSTTATITPASSNPLETKRWADVADEADAEQQAESSLADVKLDSLAIDESKQ
PSVGLTDPDDSTIEAVTSGDTPYTSAKRFEDLNLSPELLKGLYVEMKFEQPSKIQAISLP
MILTPPHKNLIAQAHNGSGKTTCFVLGMLSRVDPKILGPQALCICPTRELAIQNMEVLLK
MGKFTGITSELAIPPAEANYIPISKMGPVTAQVIIGTPGTISKWLQHKKLGLSQMKILVF
DEADHMLAMGGFRDESVRIMKAITRSNSNCQVLLFSATFNDAVKAFASKIVEEIFVKGYN
QMFVKKEELSLESVKQYKVHCPDELSKIMVIKDQILNLGDKVGQTIVFVKTKNTASMLHQ
SLVKLGYEVTTIQGALKQEDRDKIIKEFKEGLTQVLISTDILARGFDQSQVNLVINFDLP
VQYDHRSEPDYEVYLHRVGRAGRFGRKGAVFNLLCIDDDDMIIGKIEKYFNSQISEVGPW
NSQAEFEAALRNAGLL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacgagagcactgattcgtctaccaccgccactatcaccccggcgtcctcg
aatccgctggagacgaagcggtgggcggatgtcgctgatgaggcggatgcggagcagcaa
gccgaatcttcgttggcagatgtcaaattggattccttggctatcgatgagtccaaacaa
ccttctgtcggccttactgatcccgatgactccaccattgaagctgttacatcgggggac
actccatatacatcagctaaacgattcgaggacttgaatttgtcacctgaactgttgaag
ggcctttatgttgagatgaagttcgagcaacctagcaagattcaagcaattagtttgccc
atgatcctaactcctcctcacaagaatttaatagctcaagctcataatggatccgggaag
accacttgtttcgtgcttggtatgttgagccgtgttgatccgaaaatccttggtcctcag
gctctctgtatttgccccacgagggagttagccattcagaatatggaagtgcttctgaag
atggggaagttcactgggataacctcggaattagctataccgcctgctgaagcaaactac
atcccgataagtaagatggggcctgttacagcacaagtaatcattggtacaccaggcaca
atatctaagtggttgcaacacaagaaattgggtttgagtcaaatgaagattcttgtgttt
gatgaggcagaccacatgttggcaatgggtggcttccgagatgaatcagtcaggataatg
aaggctattactagatccaattccaattgccaggtccttttgttctcagccacctttaat
gatgctgtgaaggcctttgcatcaaaaatagttgaggagatctttgtaaaaggttataac
caaatgtttgtcaaaaaggaagaactatcgctggagtctgtaaaacaatacaaggttcat
tgtcctgacgagctttcaaagattatggtgattaaagaccaaatacttaatcttggagat
aaggtagggcagactatcgtgtttgtcaaaaccaagaatactgcatccatgttgcaccaa
tctctggtcaaacttggctatgaggtcactacgattcaaggtgctctgaagcaagaggat
agggacaaaatcataaaagagttcaaagagggtctgacccaagttctaatctcaactgat
attctcgctcggggttttgaccagagccaggttaatttggttatcaattttgatctgcct
gtgcaatacgatcatcgttctgagcctgactatgaagtttacttgcaccgagttggtaga
gctgggcgctttggccgcaaaggtgctgtattcaacttgctttgcattgatgacgatgac
atgattattggcaagatcgagaaatacttcaactctcagattagtgaggtgggtccttgg
aatagtcaggcagaattcgaggctgctctacggaatgctgggcttttgtga
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