Salvia miltiorrhiza (redroot sage): 130998790
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Entry
130998790 CDS
T09291
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130998790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130998790
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130998790
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
130998790
NCBI-ProteinID:
XP_057780182
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Position
1:58632204..58636130
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AA seq
590 aa
AA seq
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MAYSFPEEVLEHVFSFLSSDRDRNAVALVCRSWYEIERWCRRRVFVGNCYAVSPEIMIRR
FPEVRVVEMKGKPHFADFNLVPEGWGGYVQPWIRAMAASYPSLEEIRLKRMVVTDESLEL
IARSFKNFKVLVLSSCEGFTTDGLASIAANCRNLRELDLRESEVEDLSGHWLSHFPDNCT
SLVSLNMSCLGSEVSFSALERLVGRCPNLRTLQLNRAVPLEKLPNLLHRAPQLVEFGTGA
YSAEIRPDIYSNLAEAFSVCKQLKGLSGFWDVVPAYLPAIYSVCAGITSLDLIYAAIQSP
DLVKIISLCRHLQCLWVLDYIEDAGLEALAASCKDLQELRVFPSDPFEAEANVALTEQGL
VSVSEGCPKLQSVLYFCRQMSNAALITIARNRPEMVRFRLCIIEPRAPDYLTLEPLDTGF
GAIVENCKELRRLSMSGLLTDRVFEYIGKHAKKLEMLSIAFAGESDLGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLAQRMPRLNVEVIDERGHP
NSRPETCPVEKLYIYRTVAGRRVDMPDFIWTMDKDAGSPEGFLSNGAVEQ
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgtttccggaggaggttctggagcacgttttctctttcctgagctccgac
agggaccggaacgcggtggcgctggtgtgccggtcgtggtacgagatcgagcggtggtgc
cgccgccgagtgttcgtcgggaactgctacgcggtgtcaccggagataatgattcggcgg
ttcccggaggtgcgggtggtggagatgaaggggaagcctcatttcgcggatttcaacctc
gtgccggagggctggggcggttacgtgcagccgtggatcagggcgatggcggcgtcgtac
ccctcgctggaggagatcaggctcaagcggatggtggtcacggacgagagcctcgagctc
atcgcgagatcgtttaagaatttcaaggttttggtgctttcttcctgcgagggtttcacg
accgacggcctcgcctcgattgctgctaattgcaggaaccttagagagctagatttgagg
gagagtgaagtggaggacctaagcgggcattggcttagccatttccctgacaactgtact
tcacttgtgtcgcttaacatgtcttgtttaggctcagaggtcagtttctcagccttggag
cgcctggttggacggtgtcctaatttgagaactcttcagctaaacagggctgtacccctt
gagaagctccccaacctactccaccgggcccctcagttggttgaattcggtactggggcc
tactcagctgaaattcgacctgatatctactcaaacctggcagaagcattttcggtttgt
aagcaactcaaaggcttgtccgggttttgggatgttgttccagcttatcttcctgctata
tattcagtttgtgctggaatcacttctctggacttgatttatgcagcaattcaaagtcct
gatcttgtaaaaattattagcctgtgtcgacatttacagtgtctctgggttctggattac
attgaagatgctggtctggaagccctcgctgcatcttgcaaggatttgcaagaacttcgg
gtgtttccttcagatccttttgaggcagaagccaatgttgctttgacagaacaggggctt
gtctcggtttctgaaggctgtcccaagctccagtctgttctatacttctgtcgtcaaatg
tcaaatgccgccttaattacaattgcaaggaaccggccagagatggtccgcttccgactt
tgtatcatcgagcctcgagctcctgactatttaacactcgaaccacttgacactggtttt
ggagccatagtagaaaactgcaaggaattacgacgcctttccatgtccggcctccttact
gatcgagtttttgaatatattggaaagcatgctaagaaattggagatgctgtccatagct
tttgccggtgagagtgacttgggcctccatcacgttttgtctggatgcgatagcctgcgg
aaactggagatcagggattgtccattcggggacaaagctctcctagcaaatgctgcaaag
ctggagacaatgcgatccctttggatgtcatcatgctcagtgagctatggagcgtgtaag
ctgcttgctcaaaggatgcccaggctcaacgtagaagttatagacgagagaggtcaccct
aattcccggccagaaacatgccctgttgagaaactctacatctaccggacagttgcagga
cgaagagttgacatgcccgacttcatctggacgatggacaaagatgcagggagccccgag
ggtttcctaagcaacggtgcagtcgagcaataa
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