KEGG   Salvia miltiorrhiza (redroot sage): 130998927
Entry
130998927         CDS       T09291                                 
Name
(RefSeq) exosome complex component RRP41 homolog isoform X1
  KO
K11600  exosome complex component RRP41
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130998927
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smil03019]
    130998927
Messenger RNA biogenesis [BR:smil03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     130998927
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     130998927
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 130998927
NCBI-ProteinID: XP_057780343
LinkDB
Position
8:51326938..51329955
AA seq 244 aa
MEFVNPEGLRLDGRRPMEMRQLRAEIGVVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ
QSNDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF
VQVLQADGGTRSACINAATLALADAGIPMSDIVTSCSAGYLNGTPLLDLNYMEDSAGGPD
VTVGILPKLDKVTLLQVLSNALIFRFVVFAWSRWISLLFWLAKALESTYFSFSLELTPPT
TSSS
NT seq 735 nt   +upstreamnt  +downstreamnt
atggagtttgttaatcctgaaggtcttcgattagacggtcgccgtcccatggagatgaga
caacttcgtgcagaaataggcgtagtttcaaaagccgacggctcagctgtttttgagatg
ggaaacactaaagtcattgcggccgtttatggccccagagaggtccaaaataggagtcaa
caaagtaatgatcaggcactggtacgctgtgagtatagcatggctaatttcagtactgga
gatcgaatgaggaaacctaagggtgacaggcgatcaacagagatatctttggtcattcgt
cagacgatggaagcatgcatattgactcacttgatgcctcgatctcagattgacatcttt
gtccaagttctccaagcagacggaggaacaagatcggcgtgcataaatgctgcaactttg
gcccttgctgatgctggtatcccaatgtctgatatcgttacctcctgcagtgctggatac
ctgaacggaacccctctgctcgatctgaactacatggaagatagtgctggtggacctgat
gttactgttggcattctgcctaagttagacaaagtgaccctccttcaggtactttctaat
gcactaatttttcgtttcgtggtcttcgcttggagtagatggatttcattgctgttctgg
ttggcaaaagcccttgaatcaacatatttctctttttcgcttgaactgacccctcctaca
acgtcgtcttcctga

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