Salvia miltiorrhiza (redroot sage): 130998980
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Entry
130998980 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC130998980
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130998980
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130998980
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130998980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_2
zf-RING_11
zf-ANAPC11
XhlA
SAM_Ste50p
zf-RING_16
FlaC_arch
zf_RING_Vps8
RINGv
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
130998980
NCBI-ProteinID:
XP_057780411
LinkDB
All DBs
Position
8:51936386..51940492
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AA seq
568 aa
AA seq
DB search
MARASNVDSNSNSFAKTICSICFEDLKPLVEDLQSISVCGHVFHELCLQQWFEYCPNVKK
RSCPICKQACTNANVGRLYFQSIGDSDDCSSQKPHDCEGNPKELQREVNRLEGKVAGLSS
SLEQQQKDFKEVKEELLMCSEQLKTEVALKHEALSQTATSQQLLRVKSEELDRSTLECMR
FKERNMALARELATYRLAYDMDLKEDDAMKLASLGNDGGSREGNYLLIKSLDTHKKSYKE
LLAKCNDLGRREARCSEELENANKKIKKLKLRVRELATVVEMKENAALRVLKDQNIKLKR
NSHDNQMKRPVNQTGLDDILDISFSLEKEEFPKPMSGKCTINNKVPGFTHDRNEQVRGPP
SPNEDKDRLCSSTSIQGSSYKNSIPCADDNVIVEECRDPRPVPCFDGGKDDVELVNSDNK
VGVSFSLSLKKSRKRHRADEVPSNIDDEVICFGDTNPVQTSVHNGKETSSSTPVSEPDTH
CFTGGLLGPDGTNWHLGKWCKKAQNQGSNARAGDLIAVGADGRGGRIKVMRPLHQPSLDT
KSKQSGKPSKLGAQGVLQIEHFFRKTGQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggctagcaatgtcgactccaacagcaattcgttcgcgaaaactatatgctca
atttgcttcgaagatctgaaacccttagtagaagatcttcaatcaatctctgtttgcggc
cacgtctttcacgagctctgcctacaacaatggtttgagtactgtcccaatgtgaagaag
aggagttgtcctatatgcaaacaagcctgcacaaatgcaaatgttggacgcctttatttc
cagtcaattggtgattcagatgattgtagttctcaaaagccacatgattgcgaggggaat
cctaaggaattgcagagagaggtcaatagattggagggaaaagttgcaggtctttcttcg
tccttggagcagcaacagaaagactttaaggaagttaaagaggagctccttatgtgcagt
gagcaattgaaaactgaggtggctctgaaacatgaagctttaagtcagacagcaaccagt
cagcagttgcttcgtgtgaaatctgaggagcttgacagatcaactttggagtgcatgaga
tttaaagagagaaatatggctttggcaagggaacttgcaacatatagactggcctatgat
atggacttgaaagaagatgatgccatgaaacttgcttcactaggaaatgatggtggcagc
agagaaggaaattatcttctaataaaatctttggacactcataaaaagagttacaaggaa
ctgttggcgaagtgcaatgatttaggaagacgagaggctcggtgcagtgaagaacttgag
aatgctaataaaaagattaagaagctgaagctgagggtccgagaacttgcgactgttgtt
gaaatgaaggagaatgctgctctgagagtgctaaaagatcaaaatattaaactcaagagg
aattcacatgataatcaaatgaagagacctgtaaatcagactggtttagatgatatccta
gacatatcatttagtttggagaaagaagaattccccaagcctatgagtggaaaatgcaca
atcaacaataaggtacctggatttactcatgaccggaatgaacaagtcagaggccctccc
tcaccaaatgaagataaggatagactgtgctcctctacttcaatacaaggatcctcgtac
aaaaattcaataccatgtgctgatgacaatgtaattgttgaagaatgccgtgatccaaga
ccagtcccatgctttgatggtgggaaagatgatgtagaattggtaaactctgacaacaaa
gttggagtatctttctctttgtctttgaaaaagagtagaaagaggcatcgggccgatgaa
gttccatccaacatagatgatgaggtgatatgctttggggacactaatccagttcaaacc
tcagtacataatggaaaagagactagttcatccactccagtttctgaacctgatacccat
tgcttcactggtggtttactcggccctgatggaaccaattggcacttggggaaatggtgc
aagaaagctcagaaccaaggatcaaatgcaagagcaggcgacttaatcgcagttggagct
gatggcagaggtggccgaatcaaggttatgagacctcttcatcaaccatcactggatact
aaatccaagcaaagtggcaaaccaagcaagttgggggcacaaggagtcttgcagattgag
catttctttcgaaagactggtcaatga
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