Salvia miltiorrhiza (redroot sage): 130999679
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Entry
130999679 CDS
T09291
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Module
smil_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130999679
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130999679
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130999679
NCBI-ProteinID:
XP_057781269
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Position
8:complement(327024..330499)
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AA seq
393 aa
AA seq
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MISLISIILFSHFILSSWLGNAQGATLTFNVIRFGAKPDGITDATPPFLKAWAAACAAAT
ASTIYVPRGRYLLRSAEFRGPCKSKIRVQIDGTLVAPVDYRALGNSDYWILFIQVNWITV
VGGNLDAKGAGLWACKASGKSCPTGARSITFNWVNNAEIKGLTSINSQLMHIVINSCKNV
KVSNVKIIAPDLSPNTDGIHVQSSTGVTITNALIKTGDDCVSIGPGTRNLWMEKIKCGPG
HGVSIGSLGRAFEEDGVENVTLINSAFSGSDNGLRIKTWARPSKGFVRNINFRNIVMKNV
ENPIIIDQNYCPNNEGCPSQGSGIKISQITYQNIQGTSATKVAMTFDCSHTNPCSNIKLN
DIKLTYLKSTKAQSFCKNIAGSSGGVIMPENCL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgatttccctaatttcaatcattttattctctcacttcattctatcatcatggttgggc
aatgcacaaggcgccacgctcacattcaacgtgatccgatttggcgcgaagccagatggg
atcaccgacgccacgccgccgttcctcaaggcgtgggcggcggcgtgcgcggccgcgacg
gcgtcgacgatttacgtgccgagggggcggtacctattgaggtcggcggagtttaggggg
ccgtgcaagagcaagatcagagttcaaattgatggaactcttgtagctccggttgactac
cgcgcactcggaaattccgactactggattctgttcattcaggtgaactggatcaccgtc
gtcggggggaatctcgacgcgaagggcgccggattatgggcgtgcaaggcctccggcaag
agttgccccaccggagcaaggtcaatcacatttaattgggttaacaacgctgagattaaa
gggttaacctcgattaatagccaattaatgcacattgtgatcaatagttgcaagaatgtg
aaagtgagcaatgtgaagatcatagcgccggatctaagccctaacactgatgggattcat
gtacaatcatcaacgggagtcactatcaccaatgccctcatcaaaaccggcgacgactgt
gtatccatcgggcccgggactaggaatctgtggatggaaaagattaaatgtggccccgga
cacggtgtcagcattgggagtttgggccgagcttttgaagaggatggtgtggaaaacgtg
acattaataaattcagctttcagtggttccgataatgggcttcgaataaaaacatgggcc
cggcccagcaagggatttgtcagaaatattaattttcgaaatatagttatgaaaaatgtt
gagaatcccatcattatagaccaaaattactgccccaacaatgaaggttgtcctagccag
ggttcgggaataaaaattagccaaatcacataccaaaatatacaaggaacatctgcaaca
aaagtagccatgacatttgactgcagccatacaaatccatgcagcaatatcaaattaaat
gacattaaactcacttatttgaaatcaactaaagcacaatccttctgcaaaaacatcgcc
ggaagttccggcggcgtcatcatgccggaaaattgcttgtag
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