Salvia miltiorrhiza (redroot sage): 131000085
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Entry
131000085 CDS
T09291
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131000085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131000085
03009 Ribosome biogenesis [BR:
smil03009
]
131000085
04131 Membrane trafficking [BR:
smil04131
]
131000085
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smil04147
]
131000085
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131000085
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131000085
Membrane trafficking [BR:
smil04131
]
SNARE
SNARE associated proteins
Others
131000085
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131000085
Exosome [BR:
smil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131000085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
AAA_18
Parvo_NS1
ATPase_2
Viral_helicase1
IstB_IS21
ABC_tran
AAA_7
NACHT
Vps4_C
NB-ARC
TsaE
AAA_24
ResIII
DUF815
AAA_lid_PRS2_C
Zeta_toxin
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
131000085
NCBI-ProteinID:
XP_057781836
LinkDB
All DBs
Position
8:complement(3556320..3560562)
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AA seq
852 aa
AA seq
DB search
MHRLYTHLLSLFLYICNSQLPFFSQAKLPSTNAHLQILQHRNSQIMSNQAESSDSKGGKK
DFSTAILERKKAANRLVVDEAVNDDNSVVSLHPATMEKLQIFRGDTILIKGKKRKDTVCI
ALADDACEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPMDDTIEGLTGDL
FDAYLKPYFLEAYRPVRKGDHLLVRGGMRSVEFKVVETDPGEYCVVAPDTEIFCEGEPIR
REDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK
TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP
KREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV
PDEVGRLEVLRIHTKNMKLSEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID
LEDDSIDAEILNSMAVTNEHFHTALGISNPSALRETVVEVPNVSWEDIGGLENVKRELQE
TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW
FGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGM
NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDVD
LRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKRLDNPDSMDEDETDEVSEI
TPSHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFPESAAGGASAADPFAAP
AGGAADEDDLYS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgattatacacacatctactatctctatttctctacatttgcaactcacagctc
cctttcttctcccaagcgaaactaccaagtaccaacgcgcatctccagattctccaacac
cgcaattctcagatcatgagcaaccaagccgagtcctccgattcgaaaggtgggaagaag
gacttctcaaccgcgattttagagaggaaaaaggcggccaaccgcctcgtcgtcgatgag
gcggtcaacgacgacaactccgttgtctccctccaccctgccaccatggagaagctccag
atttttcgtggagatactattttgatcaaggggaagaaaagaaaagatactgtctgcatt
gcccttgctgatgatgcatgtgaagagccaaagattaggatgaacaaggttgtcagatca
aatttgagagttcgactgggggatgttgtatctgtgcatcagtgtccagatgttaaatat
ggaaagcgtgtgcacatactacccatggatgatacgatagaaggtctcactggggacctt
tttgatgcatatctcaaaccatactttctggaggcatatcgccctgtaaggaaaggagac
catcttcttgtgagaggtgggatgaggagtgtggaatttaaggttgttgagacagatcct
ggggaatattgtgttgtggctcctgatactgagatcttctgcgaaggggagcctatcagg
agagaggatgaagatagactagatgaagttggctatgatgatgttggtggcgttcggaaa
cagatggctcagatccgtgaattagtggagttgccactgagacatccgcagctattcaaa
tctattggcgtgaagcctccaaaaggaattttactttatggacccccaggttctggaaag
actttgattgctcgagctgttgccaatgaaactggtgctttcttctttttgattaatggt
ccagaaattatgtctaaattggctggagagagtgagagtaatctgagaaaggcatttgag
gaggctgagaagaatgctccatctattatttttattgatgaaattgactcgatagctcct
aagagagagaaaacgcatggagaagttgagaggaggattgtttctcaactcttgactctc
atggatgggttaaaatctcgtgcgcatgttatcgttatgggcgcgactaaccgaccaaac
agcatcgaccctgctcttaggaggtttggtaggtttgacagagagatagatattggtgtt
cctgatgaagttggacgcctcgaagttcttaggattcataccaagaacatgaagctttcc
gaagatgttgatttagaaagaatagcaaaggacacccatggctatgttggtgctgatctt
gcagctctctgcacagaagctgcactccagtgcatcagagagaaaatggatgttatcgat
ttggaagatgattcaattgatgcagagatactgaactctatggccgtaacaaatgagcac
ttccatactgctcttggaataagcaatccttctgctttgcgtgagacagtagttgaagta
cccaatgtctcttgggaagatattggaggacttgagaatgttaagagggagcttcaggag
actgttcaatatcctgtggaacatccagagaagtttgagaaatttggcatgtcgccttca
aagggtgttttattctatggccctcctgggtgcggtaagacgctgctcgccaaggcaatt
gcaaatgaatgtcaggccaattttatcagtgtgaaagggcctgagctgcttaccatgtgg
tttggagagagtgaagctaatgtccgtgaaatatttgacaaggctagacaatctgctcct
tgtgttctcttctttgacgagcttgactctattgctacccagagaggaagcagtgttgga
gatgctggtggtgctgctgatagagttctcaaccaacttcttactgaaatggatggcatg
aatgccaaaaagactgttttcatcattggggccactaacagacctgacataattgatcct
gcgcttcttcgcccaggtcgtcttgatcaattgatatatatccctctgccagatgaggat
tctcgtcatcaaatcttcaaagcctgccttcgtaaatccccactttccaaagatgtcgat
ctacgagctctggccaagtacactcaaggatttagtggggcagacatcacagagatctgt
cagcgggcttgcaaatatgccattcgagagaacattgagaaagacatagaaagagagagg
aagagattagataatcccgactcgatggatgaagacgagaccgatgaagtgtcagagatc
acgccttcgcattttgaggagtcgatgaaatatgctcgcagaagtgtgagtgatgctgat
atacgcaagtaccaggcttttgcgcagaccttgcagcagtctcgtggattcgggacggaa
ttcaggtttcctgaatccgccgcgggtggagcatctgcagccgacccgtttgcggcccct
gccggcggagctgctgatgaagacgacttgtatagttag
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