KEGG   Salvia miltiorrhiza (redroot sage): 131000180
Entry
131000180         CDS       T09291                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03082  ATP-dependent chromatin remodeling
smil03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131000180
   03083 Polycomb repressive complex
    131000180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smil03036]
    131000180
Enzymes [BR:smil01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     131000180
Chromosome and associated proteins [BR:smil03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     131000180
   HDAC complexes
    Sin3A-HDAC complex
     131000180
    BRAF-HDAC complex
     131000180
    REST complex
     131000180
    SHIP complex
     131000180
    MiDAC complex
     131000180
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     131000180
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    131000180
  Chromatin remodeling factors
   NuRD complex
    131000180
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 131000180
NCBI-ProteinID: XP_057781937
LinkDB
Position
8:4480505..4485556
AA seq 430 aa
MRSKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLAYELHNKMEIYRPHKAYPVEL
AQFHSPDYVEFLQRITPDKQVLFANEMAKYNLGEDCPVFENLFEFCQIYAGGTLDAARRL
NNRLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKDVGEKEGKNYAINVPLRDGIDDGSFLRLFKT
IILKVVECYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAACVKFVKQLNLPLLVTGGGGY
TKENVARCWTVETGALLGVELASEIPENEYFKYFAPDYSLKCASGHMENLNSKSYLNNIR
QQVCENLSAIQHAPGVQMQEVPPDFYIPDFDEDEQNPDERVNRHMQDKQVQRDDEYYEGD
NDNDQNNDDS
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgcagcaaggacagaatttcctatttttatgacggggatgtgggaaacgtttacttc
gggcctaatcacccaatgaagccgcaccgtttgtgcatgacgcaccatttggttctggcg
tatgagcttcacaacaagatggaaatttataggcctcacaaggcgtatcctgtggagcta
gcacagttccattctccggattatgtggagtttctgcagcgaatcactcccgacaagcaa
gtactcttcgctaatgaaatggccaaatataatcttggtgaagattgtccagttttcgag
aatctttttgagttctgccaaatttatgctggtggtacattagatgctgcacggagatta
aataatcggctctgtgatattgccataaattgggctggtggattgcatcatgcaaaaaag
tgcgaggcatctgggttttgttacatcaatgaccttgtgttgggaattctggagctcttg
aagtaccatgctcgtgtgttatatattgatattgatgtgcatcatggtgatggggttgaa
gaagccttttatttcactgatagggtgatgacagttagtttccacaagtatggtgacttg
ttctttcctggaacaggtgatgtcaaggatgttggagaaaaagaaggcaaaaattatgcc
ataaatgtacctcttagggatggaatagatgacgggagcttcttacgtctctttaaaacg
atcattttgaaagttgtcgagtgctatgctcctggagctattgttctccaatgtggagca
gattcacttgctggggacagattgggatgcttcaacctttctattgatggtcatgcagct
tgtgtgaagtttgtcaagcaacttaatttgcccttgctggtaactggaggtgggggatac
accaaagagaatgtggctagatgttggactgtggagacaggagctcttctaggtgtggag
cttgctagtgagatcccagaaaacgagtacttcaaatattttgctccagattactccttg
aaatgtgcaagtgggcatatggagaatttgaatagcaaatcataccttaacaacatcaga
caacaagtttgcgaaaatcttagtgccatccaacatgcacctggcgtacaaatgcaagag
gtgcctccggatttctatattcctgattttgatgaggacgagcagaatcctgatgaacgt
gtaaatcgacacatgcaagacaagcaagttcagcgtgacgacgaatactatgaaggtgat
aatgacaacgatcaaaataacgatgattcgtag

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