KEGG   Salvia miltiorrhiza (redroot sage): 131000190
Entry
131000190         CDS       T09291                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03030  DNA replication
smil03410  Base excision repair
smil03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131000190
   03410 Base excision repair
    131000190
   03420 Nucleotide excision repair
    131000190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smil03032]
    131000190
   03400 DNA repair and recombination proteins [BR:smil03400]
    131000190
Enzymes [BR:smil01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     131000190
DNA replication proteins [BR:smil03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    131000190
DNA repair and recombination proteins [BR:smil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      131000190
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE RNase_H_2 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 131000190
NCBI-ProteinID: XP_057781956
LinkDB
Position
8:complement(4563620..4583476)
AA seq 2217 aa
MMNGSDNRRKDRWESRISKKQQLILNAEEQLESKLGFDLFTEGDKRLGWLLTLASSSWED
RETSKVYSCVDLYFVCQDGSMFKAKYKFRPYFYAATKDKMETDVEAYLRRRYEGQIADIE
IVEKEDLDLKNHLSGLHKCYLKISFDTVQQLMQVKKDLVHVVERNKAKLDAEDAYESILA
GKSKQRLQDFIDCINDLREFDVPYHVRFAIDKDIRCGQWYDVSVSSAGILVERRTDLLQR
AEVHVCAFDIETTKLPLKFPDAEYDSIMMISYMIDGQGYLIINRECVGEDIEDLEYTPKP
EFEGCFKVKNVKDEKGLLSLWFAHMQDVKPGIYVTYNGDFFDWPFLETRAAHHGYNMNEE
LGFRCDKLQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
RFAKERPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLL
MVQAYKANVICPNKHQSDPEKFYHNQLLESETYIGGHVECLESGVFRSDLPTSFKLDPAA
YEQLLENLDRDLQYAIIVEGKMDLESVSNYDEVKNAIWEKLVKLRDDPICEEFPLIYHLD
VAAMYPNIILTNRLQPPSIVTDEICTACDFNRPGKNCLRTLEWVWRGETYTAKRSDYYHI
KRQIESEFVDGMNGKLSNSFLDLPKAEQQLRLKDRLKKYCQKAYKRVLDKPITELREAGI
CMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVERIGRPLELDTDGIWC
CLPGSFPENFTFKTKDSKKKLTISYPCVMLNVDVARNNTNDQYQNLKDPFSKTYTTHSEC
SIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA
ELFDKFLHGGTLEECYSAVAAVANRWLDLLDNQGEDVADIELLDYISESSTMSKSLADYG
QQKSCAVTTAKRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETEPEIMK
FYVKKWCKVSSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHK
KVKEKDDKFRQRKLVDIFSRKEKDDAVGLSGNPQANGHSTDGQNITDMEDFRSGKTPRVR
PQPIVRSYAIHNEQHQVETSNLVESAQQNDRETGHKQSTHPLQKAPEETIDRDVDYQGWL
ESRKRKWRGTREKRKRQRLNLINNAEVPSSAANYKQAPGVGVNSYFQRHDLALTRCYWQI
IQLEPSGQHGHFVAWVVVEGAMRKIPILVPRVFYLNSKAPVTEEFPGRRVNKILPHGHQS
YNLIEVIIDEDQFRTESKKLAAHLADPEVEGIYETKIPPEFNAILQIGCVCKVDKSAKKR
NFQDGWSISELHMKTTTECPYMELSYTFFYLYHSICDSRATFVAYFPASSQIAVVVVSPF
QSKELSSQMLDRQFREACQALSLQTPTNEGITFKVDYVGHVKDAQGHLQRMITEYRHRHH
GPVIAVIECPNIQLLKSGIRSLEDFPCVTIPSNARDSQYQAIGWQVIAAKIGLQRCAASS
QWLNERVTLSRYAHVPLGNFEVDWLIHTADIFFSRALRDQQQVLWISDNGFPDLGGTNED
VPCFIDEVNQPILTYPGAYRKVTAELKIHHLTVNALLKSNQVNEMEGGALFGFDQDMNSS
SSNTEKQYCYDEEISCAPAFRVLKQLIQRCLADAVTSGNVFADAVLQHLYRWLCSPVSKL
HDPALHRMLHKVMQKVFALLLAEFRKLGATIVFASFSRIIIDTGKSDLSAAKAYCESVLK
TLQTRDLFEWIELEPFQFWHSLLFMDQYNYGGIQARSEDRSTEECTSAVAESVCADSQVD
IVSNWAIAENLTKATQDHFILIVSEFLYFPWKFAQEEAEKRASGTGDLCTPSITAATAEI
LESQKTEFLKKKIASDFTDKLLKIVCDPHLHIKGRNKSESDPPEGLHSSANVQKGDAALD
FIKYVCAVLALDQNVQHEVLVMRRNLLKLVRVREFAPEAEFHNLQTSLTLPNVICSYCND
CRDLDLCRDRGLIGQEWRCGVAQCGQAYDREVMENALLQIIRQRERLYHLQDLVCLKCNQ
IKAAHLAEHCSCAGSFVCKEESAEFCSKMQIFQNVAVDQKFQLLQESVSWILQTKWL
NT seq 6654 nt   +upstreamnt  +downstreamnt
atgatgaatggcagcgacaacaggaggaaagatcggtgggaatctcgtatttcaaagaag
cagcagctgattctaaatgcagaggagcagcttgaatccaagctcggattcgatctcttt
accgaaggcgataagcgcctgggctggttacttactttggcctcttcgtcttgggaggac
cgggaaactagtaaggtgtacagttgcgtcgatttgtattttgtttgccaggatggttca
atgtttaaggcgaagtataagtttcggccttatttttatgctgccaccaaggataaaatg
gaaaccgatgttgaggcgtatttgagaaggcgttatgagggccaaattgcagatattgaa
attgtagagaaagaagatcttgatcttaaaaatcacctgtctggtctgcacaagtgctat
ttaaagatatcttttgatactgttcaacaattgatgcaagtaaagaaagatcttgttcat
gttgttgaaagaaacaaagcaaagttggatgccgaggatgcatatgagtccatattggca
gggaaaagcaaacaacggctccaagatttcatagattgtatcaatgatcttcgtgaattc
gatgtaccttatcatgttcgcttcgcaattgacaaagatataaggtgtggacagtggtat
gatgtaagtgtgtccagtgctgggattttagtagaaaggagaacagatctgttgcaacgt
gcagaagttcatgtctgtgcttttgatattgagactacaaagctgcctttaaaatttcca
gatgctgaatatgattcaatcatgatgatttcatacatgattgatggccaagggtacctc
atcattaatagagagtgtgttggggaggatatagaggatttggagtacactcctaaacca
gagtttgaaggttgtttcaaagtgaaaaatgttaaagatgagaaaggacttcttagcctg
tggtttgcccatatgcaagatgtaaaacctggtatatacgtgacatacaacggagacttt
tttgattggccattcctggaaaccagagcagcccatcatggttacaacatgaatgaagaa
cttggatttcgatgtgacaaacttcaaggtgaatgtcgtgccaaatttgcttgccacctg
gattgttttgcttgggttaaacgtgatagttatctccctcaaggcagccaaggcttaaag
gctgtgacaaaagccaaattgggctacgatcctttagaagtcaatcctgaggatatggtt
cgctttgcaaaagaaaggccgcagatgatggcatcatattctgtttctgatgctgttgca
acttactacctgtatatgacatatgtacacccctttattttctccttagcaaccataatt
ccgatgccaccagatgaagttctacgaaaaggaagtgggactctctgtgaaatgcttctt
atggtccaggcatacaaagctaatgttatctgccctaataaacaccaatctgatccggag
aaattttaccacaatcagctccttgagagtgagacatacattgggggacatgtggaatgc
ctggaaagtggagtttttagatctgatcttccaacaagtttcaaactcgatccagctgct
tatgagcaattactagaaaatctagaccgggacctgcaatatgctatcatagtggaggga
aagatggatctggaatcagtttcaaattatgacgaagttaagaatgccatttgggaaaag
ctggtgaaactgcgagatgacccaatatgtgaagaatttccgctcatatatcatcttgat
gttgctgctatgtatccaaacatcattttgacaaacaggcttcagccaccttcaattgtt
acggatgaaatatgcactgcatgcgattttaatcgtcctgggaaaaattgccttaggacg
cttgaatgggtttggcgtggagagacatacacagcaaagagaagtgattattatcatata
aagaggcaaattgagtctgagtttgttgatggcatgaatggaaaattatccaactctttc
cttgacctgcctaaagcagaacaacaattgagactaaaggatagactaaaaaaatactgc
caaaaggcatataaaagggtgctggataaacctattactgaacttcgagaagcagggatc
tgcatgcgtgaaaacccattctatgttgacactgtccgcagctttcgagatagaaggtat
gaatacaaagggcttaataaggtttggaagggaaagttgtccgaagcaaaagccagtggg
aattctatcaaaatccaggaagcacaagacatggttgtgctttatgattcattgcaactt
gcccataagtgcattctcaactccttctatggatatgttatgcgcaagggtgcaagatgg
tattccatggaaatggctggggttgttacgtatactggagctaaaataattcagaatgca
cgcttactggttgaaagaattgggaggcctcttgagttagacactgatggtatttggtgt
tgtttaccaggatcattcccagagaacttcacatttaagacaaaagactcaaagaagaag
ctgacaatttcatatccctgtgtcatgctaaatgtggatgtggctagaaacaacaccaat
gatcaataccagaatctaaaagatcctttcagtaagacatatacaacgcatagtgagtgc
tcaattgagtttgaggtggatggaccatataaggcaatgattataccagcttccaaggag
gaagggattttgattaagaaacgctatgcagttttcaatgatgatggtaccctagctgaa
ctcaagggttttgagatcaagcgaagaggtgagctgaagctcatcaaagttttccaggct
gagctttttgataagttccttcacgggggaacattagaagaatgttattcagctgttgct
gctgttgcaaatcgttggcttgaccttcttgataaccaaggggaggacgtcgcagatatt
gaattgcttgattatatatcagaatcaagcacaatgagcaagtccttagcagactatggt
caacaaaagtcatgtgcagtaaccacagcaaagcggttagctgatttcctcggggatgca
atggttaaagataaaggattgcgctgtcagtatattgttgcgtgtgaaccaaagggaacc
ccagtaagtgagcgcgctgttcctgttgcaatttttgagactgaaccagaaattatgaag
ttttatgtgaagaaatggtgcaaagtctcatcagatgttggcatccggtcaatcattgat
tggtcatactacaagcaaaggcttagttcagctattcaaaaaataatcacaatcccagct
gccatgcaaaaggttgcaaaccctgtcccaagggttgttcatcctgattggttgcacaag
aaagttaaagaaaaagatgacaagtttcgccaacgaaagttggttgatattttcagccgg
aaagaaaaagatgatgctgtgggattgagcggtaatcctcaagctaatggtcactctaca
gatggacagaatattacagacatggaagactttagatctggaaaaactcctcgcgtgagg
cctcaacctattgttcgttcatatgccatccataatgaacagcatcaagttgaaacaagt
aatcttgtagaaagtgcgcagcaaaatgatagagaaactgggcataagcagtcaactcat
ccattgcaaaaggctcctgaagagactatcgatagagatgtcgactatcaaggatggttg
gagtcaaggaagagaaagtggagagggactcgggaaaaaaggaaacgtcaacggttaaat
cttattaataatgcggaggttcccagtagcgctgccaattacaaacaggctccaggtgtt
ggggtgaattcatatttccagaggcatgacttagcgctcacccgttgctattggcagatt
attcagcttgaaccaagtggacaacatggccattttgttgcttgggtagttgtagaagga
gcaatgcgtaagatccccatattagttcccagagtattctacctcaactctaaggcgcct
gtaacagaagaattccccggaaggcgtgtaaacaagattcttccccacggacaccaaagc
tacaacctaattgaggtcataattgatgaagaccaatttaggaccgaaagcaagaaattg
gccgctcaccttgcagatcctgaagttgagggaatatacgaaaccaagattccaccggag
tttaatgccatccttcagattggctgtgtctgtaaagtggataaatcagccaaaaaaaga
aacttccaagatggctggagtataagtgaattgcatatgaagacaacaactgagtgccca
tatatggaactttcatatactttcttctacttgtatcatagcatctgtgacagccgcgcc
acgtttgttgcatattttcctgcatcaagccaaatagctgttgtggttgtcagtcctttc
cagagtaaggaattgtcctctcaaatgctagatagacaatttcgtgaagcttgccaagca
ttatccttgcaaactccaacaaatgaaggcattacattcaaggtggactatgttgggcat
gtcaaagatgctcaaggacacttgcagaggatgataactgaatacagacataggcatcat
ggacctgtgatcgctgttatagagtgccctaatattcagttattgaagtctggcattagg
tcattggaagactttccttgtgtaaccataccatccaatgctcgtgatagccaatatcag
gctattggttggcaagtaattgctgctaaaattggactacaacgatgtgctgcatcatca
caatggttaaatgagagagttacactttcacgatatgcccacgttccattaggaaatttt
gaagttgattggctcatacataccgctgatattttcttctcgagagctttgcgtgatcag
caacaggttctgtggatatctgataatggcttcccagacttgggaggcactaatgaagat
gtaccctgctttatagatgaggtcaatcaacctatcctcacttatcctggtgcatatagg
aaagttacagctgagcttaagatccatcacctaactgtcaatgctcttctcaaaagtaac
caagtgaatgaaatggaaggaggggcattatttggttttgaccaggacatgaattcatct
tcatctaatacagagaaacaatattgttatgatgaggaaatttcatgtgctcctgcattt
cgtgttctgaaacaattaatccaaagatgccttgccgatgcagttacatcaggaaatgtc
tttgcagatgctgtattacagcatctctaccgatggctttgcagtccggtatctaaactt
catgacccagctctccatcgcatgcttcataaggttatgcaaaaggtgtttgctttgctt
ttggcggagttccgcaaattaggtgcaactattgtatttgcaagcttcagcagaattata
attgatactggaaagtcagatctatctgccgcaaaagcttattgtgagagtgtacttaaa
actcttcaaacaagggacttgtttgagtggattgaactcgagcctttccagttttggcat
tccttactctttatggatcagtacaactatggtggaattcaagctagatcagaagataga
tccacagaagaatgtactagtgctgttgcagaaagtgtgtgtgctgactctcaagtagat
atcgtctccaactgggccatagctgaaaacttgacaaaagcaactcaggatcactttatc
ttaattgtatcagaatttttgtattttccatggaagtttgcacaagaagaagcagaaaag
cgagcatctggcacgggagacttgtgcactccatcaattacagctgcaactgctgagatt
cttgaatcacagaaaacagaattcctgaagaaaaagattgcatctgactttacagataaa
cttctcaaaattgtatgtgatccacatcttcacataaaaggaagaaacaagtctgagagt
gatcctcctgaaggtttgcattcttcagccaatgtccaaaagggggacgctgctctggat
ttcatcaagtatgtctgtgcagttttggcacttgaccaaaacgttcagcatgaagttctg
gtcatgagaaggaatcttctgaaattggtccgtgtaagagaattcgctccggaggctgaa
tttcataatctacagacatccttaactttaccaaatgtcatttgcagttactgcaacgac
tgcagggatctagatctgtgccgtgacaggggattaattggccaggaatggcgttgtggt
gtggctcaatgtgggcaagcttacgaccgtgaagtgatggagaatgctctcctccagatt
attcgccagagggaaaggctgtaccaccttcaagacctggtgtgcctcaagtgcaatcag
atcaaagctgcacatttagccgagcattgctcgtgcgctggatcatttgtttgcaaggaa
gagtcagctgagttctgcagcaaaatgcagattttccagaatgtggcagtggatcagaag
tttcagctcctccaagaaagtgtgtcttggatcttacaaaccaaatggctgtga

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