Salvia miltiorrhiza (redroot sage): 131000220
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Entry
131000220 CDS
T09291
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131000220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131000220
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131000220
mRNA degradation factors
5'-3' decay
Decapping complex
131000220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
TFIIA_gamma_N
Motif
Other DBs
NCBI-GeneID:
131000220
NCBI-ProteinID:
XP_057781998
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Position
8:4799902..4803971
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AA seq
335 aa
AA seq
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MGKNKEKLKPILDEKITKELNLRVLQRIDPCIEEILTNAAHVAIYELNIEASQWSRKNVE
GSLFVVKRNTKPHYQFIVMNRQNTENLTESLWGDFVCEVQDSYLLYRNHTEEVNGIWFYI
SNDCKEIANLFTRILNEYPEVPTELKVSSKESEVEKDAALEPSSTADSNVADGIDDLSVV
KISSLDQSPTALVSDPPTSPSISAPAPVTSPSTLKLSIPAISEPKDAKTYMTDLVKPSLF
LSPHPSSPHILPSITSFAPPPPHSPLISPSNLKRPHGELLLPMFPPPSPQSSTPTSVPTP
TCISREKIRKALQFLIQDDQFIEIVYRAVVNAPDD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaataaggagaaattgaaaccgattctggatgagaagatcaccaaggagctg
aatctgagggtgctgcagaggattgatccttgcattgaggagatcctcaccaacgctgct
cacgtcgcaatctacgaattgaacatcgaggcttcgcagtggagtcggaagaatgttgaa
ggctctcttttcgttgtgaaaaggaatactaaaccacactaccaatttatagtaatgaat
cgtcaaaacacagaaaatcttacggagagtctctggggagattttgtgtgtgaagtgcag
gattcatatctgttatacagaaaccacactgaagaggtaaatggaatatggttctatatt
tcaaacgactgtaaggagattgcaaatctgtttaccaggatacttaatgaatatcccgag
gtgcctacagagctgaaagtgtcttcaaaagaaagtgaagtggaaaaggatgctgcccta
gagccatcatctactgctgactccaatgttgcagatgggattgatgatctatctgttgtg
aaaatttccagtctggaccagtctccaacagctcttgtttctgatcctcccacttcacca
tcaatatcagctccagctcctgtcacatctccttctaccctaaaattgtccattcctgca
atttctgaacctaaggatgctaagacgtacatgactgatctggtgaagccatcattattt
ttaagcccacatccttcttctccacatattttgccatccataacttcatttgctccccct
ccaccacactctcctctcatttctccttcaaatctaaaacgacctcatggagaacttcta
cttccaatgttcccaccaccatccccacaatcttccactccaacttctgttcctacacct
acgtgtattagcagagaaaaaatcaggaaagcacttcaatttcttattcaggacgatcaa
ttcatcgagattgtttacagagcagtggtgaacgcgcctgacgactga
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