Salvia miltiorrhiza (redroot sage): 131000343
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Entry
131000343 CDS
T09291
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131000343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smil03032
]
131000343
03400 DNA repair and recombination proteins [BR:
smil03400
]
131000343
DNA replication proteins [BR:
smil03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
131000343
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
131000343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
YNCE
Motif
Other DBs
NCBI-GeneID:
131000343
NCBI-ProteinID:
XP_057782192
LinkDB
All DBs
Position
8:5621218..5627730
Genome browser
AA seq
1444 aa
AA seq
DB search
MLESKQAAYDDPSNAFVGIRFVLLGFDSVREDEVRSKLLEGGGVDAVNYGPDCSHVIVDK
IAYSDPICAAARRDGKILVTGLWVDHSFDVGTAIDPVSVMYCPPRDLNGIPGAKSLVMCL
TGYQRHDRDDIMNMVALMGANFSKPLVANKVTHLICYKFEGEKYELAKKMKTMKLVNHLW
LEDSLKAWELLPEADYAKSGYELEMEAEAKDSEDETEDMASVDLKKKGIISPHNIQVENK
NFHQSPERQGLSRTSGYVTAFESFANVGNTSKTHSTPRKENTCKTQSTPRKETNFGKASL
SRDTSNSSCARSPAKMFSGVPSNVPDGTTNSENIEHVLASVSGSAKKSVDGGLSKLSSKM
KKACLPLRSERIESNSGSPLSNVSETRLHGGLDIPTERDLDGTDCHGIRSPLKGSLLLPN
EGQTVGSASKKKPTVPRGSSRSPVLSHSAKTLIRSGLATKPMEIPVSRSSVDGSCRLACD
ISPIKGSSFLRQEVTGGFIMPSEKIQDGTGSAGIKTPVKGTVLHLDEEQTSSLPGTKKMT
VSRSGSKSRRLSRSPTTGASCLREEVGGGFVLPSETIQDGTESTGIMTPLQGALLYLDEE
QPSSLRGTKKMTVPRSGSKSTKLSRSPNILMGSGLDTNPMEMPVSGSSVHGTHQLAAAVP
PTNVNSSLREEVGDVLNMPSERDEDGIKSGGVKTPSEGASLHHDEEQTSSLPGRKKMSVS
RRNSKSTKLSRSRKTLAGSVLDTKATVTPVSGSSIHGSRQSAIDTSPPKNITSHLREEVS
LASKEALAITTSLEEKQECNDQTVKSSRGRPRKRSLPDSDVKDLSQSRNKSCTVGEQIHQ
SDPPDFRPPFPSTSSTVENSSKVDRSGIKSKSPKKNMLARKTLGSKPTICKGKTTKHKGL
LSAVLQNMVAGHSNGAVAIEDTNNASLAEKFVTVSSNPNEDVPVGDETEAPVCEGPNEFD
MGSKNFVEVEEPHTRKQPSKKTTQRKEAKSKVKKSTEAKKLAELPESKSTGDVAEKKISE
GKKRPLAKSKMNKLKDPAEETKEDEKKTASSNEEMVVLAGKTNKRPSKKLKGSHDVEKEN
EPVTNEQPLVSCDTGATGKSTPHKLKKPLKSASKVDKVNTEDLTTKTEAPWFILSGHKLQ
RKEFQQVIRRLKGKVCRDSHNWSYQATHFIVPDPIRRTEKFFAAAASGSWILKTDYLTAS
TEAGRFLSEEPYEWHKKCLTEDGAINLEAPRKWRLLRERTGHGAFYGMRIVIYGECIAPP
LDTLKRVVKAGDGTILATSPPYTRFLNTKIDFAIVSPGMPRVDMWVQEFLRHEIPCILVD
YLVEYVCKPGYSLDKHVQYNSHAWAKRSLENLVNRVEEAVEDPKTPEQHRVDDAACEVCG
SRGRGAEMLICGDESGTRGCGVGTHIDCLDPPLEAVPEEDWFCLDCCRKTGSRSSKKRAK
KSKK
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaagcaagcaagcagcatacgatgacccttccaatgcgtttgtaggaattcga
ttcgttctcctcgggttcgactcagttagagaagatgaggtccggtcgaagcttttagaa
ggtgggggagttgacgctgtgaattacgggccggattgtagtcacgtgatcgtcgataag
attgcttatagcgatcccatatgcgctgctgcacgaagagatggcaagatattggtgact
ggactatgggtggatcacagttttgatgtgggaacggctattgatcctgtgtctgtcatg
tattgtccaccaagagatctgaatgggattccaggtgccaaatctctggttatgtgcctg
actggatatcaaagacatgatcgagatgatatcatgaatatggttgcattgatgggtgcc
aatttttcaaagccattggtggctaacaaggttactcatctgatatgctacaagtttgaa
ggggagaaatatgagcttgccaagaagatgaagacgatgaagctagttaaccatctctgg
ttagaagatagcctgaaggcttgggagctgcttccagaagctgattatgctaaaagtgga
tatgagttggagatggaggctgaagctaaagattctgaagatgagacagaagacatggct
tcagttgatctgaagaagaaaggcatcatcagtcctcacaatatacaagttgagaataaa
aatttccatcagtcacctgaacggcaggggctttcaagaaccagtggctatgtgactgca
tttgaaagttttgcaaatgttggaaataccagcaaaacccactcaacccctagaaaagag
aatacctgcaaaacccagtctactcctcgaaaagagaccaactttggaaaagcatcatta
tctcgtgatacgtcaaactcttcttgtgccaggagtcctgctaaaatgttttctggggtg
ccatcaaacgtgcccgatggtacaacaaactcggaaaacattgagcatgtcttagcttca
gtatctggaagtgctaagaagtccgttgatggtggcttgtccaaattaagtagcaagatg
aagaaggcctgtctccctttgaggtcagaaagaattgaaagtaattcaggcagtcctttg
tcaaatgttagtgaaaccagacttcatggaggtttggacataccaacggagagagatctg
gatgggactgattgtcatggcatcagatcaccattgaagggaagcttgttgctccctaat
gaggggcaaaccgttggctctgccagtaagaagaaaccaactgttccccgtggtagttcg
agatcaccagttttaagccattccgcaaaaacattaatcagaagtggattggctacaaag
ccgatggaaataccagtttctagatcttcagttgatggttcatgccggttagcctgtgat
atatctccgattaaaggtagtagctttttgaggcaagaagttactggtggttttatcatg
ccatcagagaaaattcaagatggaactggatctgctggaataaagactcctgtaaaggga
accgttttgcaccttgatgaggaacaaacaagcagtttgcctggtacgaagaagatgact
gtttcacgtagtggttcaaaatcaagaaggctaagtcgttctccaactacaggagctagc
tgtttgagggaagaagttggtggcggttttgtcctgccatcagagaccattcaagatgga
actgaatctactggaataatgactcctttacagggagccttgttgtaccttgatgaggaa
caaccaagcagtttgcgtggtacgaagaaaatgaccgttccacgaagtggttcgaaatca
acaaagctaagccgatctccaaatatattaatgggaagcggattggatacaaatccaatg
gaaatgccggtttctggatcttcagttcatggtacacatcaattagctgctgctgttccc
cccacaaatgttaatagttctttgcgggaagaagttggcgatgttcttaacatgccgtct
gagagggatgaagatggaattaaatctggtggagtaaaaactccttcagagggagcctcg
ttgcaccatgacgaggaacaaaccagcagtttgcctggtaggaagaaaatgtctgtttca
cgtaggaactccaaatcaacgaaactaagccgttctcgtaagacattagcgggaagtgta
ttggatacaaaagcgacggtaactccagtgtctggatcttcgatccatggttcacgtcaa
tcagctattgatacatctcctcccaaaaatattaccagccatttgagagaggaagtttca
ctggcatccaaagaagctttagcaattactacctcactagaggaaaaacaagagtgcaat
gatcaaactgttaaatcttctcgaggaagacccagaaagcggagtttgcccgattctgat
gtcaaggacctttctcagagcaggaacaaatcttgcactgtgggagaacaaatacatcaa
agtgatccaccagatttcagacccccatttccgagtacaagctctactgtggagaactct
tcaaaggtagatcgtagtggcatcaaatcaaaatccccaaagaaaaatatgcttgccagg
aagacattgggttccaaaccaactatctgtaaaggaaaaactacaaaacataaagggctg
ctgtctgctgtattgcagaatatggtcgcaggtcattcgaatggagcagtagctattgag
gacacgaacaatgcttctcttgctgagaaatttgtcactgtctcttcaaaccccaatgaa
gatgtacctgtaggtgatgagactgaagctccagtatgcgaagggccgaatgagtttgat
atggggagtaagaattttgtggaagtcgaagaacctcatacaagaaagcaacccagcaag
aaaaccacacaaaggaaggaggcaaaatcgaaggttaagaagagcactgaagctaaaaaa
ttggcagagttgccagaatcaaaatcaacaggtgatgttgcagagaaaaaaatatctgag
ggcaagaaacgtcctttggctaaatctaagatgaataagttgaaggatcctgcagaggag
accaaagaagatgagaagaagactgcctcaagcaacgaagaaatggttgtgttggctggt
aaaaccaataaaagaccatctaagaaactaaaaggttcacatgatgtggagaaggaaaat
gaacctgttacaaatgagcaaccacttgtaagctgtgatacgggagcaactggaaagtct
actcctcataaactcaaaaagcctcttaaaagtgccagtaaagtcgacaaggtcaataca
gaggatctaaccacgaagactgaagctccatggttcatattgagcgggcataagcttcaa
aggaaggagtttcagcaggttataaggcgattaaaaggcaaagtatgcagggactctcat
aattggtcatatcaagcaacacattttattgtcccagatcctattcgaagaactgaaaag
ttctttgcagctgctgcatctggaagctggattctcaaaactgattatttaactgctagc
accgaggctgggagatttttgtctgaagaaccatatgaatggcataagaaatgcttgact
gaagatggagcaatcaacttggaagctccaaggaaatggcgtcttctgagagagagaact
ggtcatggtgcgttttatggaatgcgtatagtcatatacggagagtgcattgctccgcca
ctggatacattgaagcgtgtagtgaaggccggagatgggaccatactagcaacctcgccc
ccatacacacggtttctaaatacgaagattgattttgccattgttagcccgggcatgccc
cgtgttgacatgtgggtgcaggagtttctcagacacgagataccctgcattctagtcgac
tatttggtagagtacgtgtgcaagcccggttactccctcgataagcatgtgcaatacaac
agtcatgcttgggcgaagagatcactcgagaatctggttaaccgtgtggaggaggctgtc
gaggaccctaagacaccggaacagcaccgcgttgatgatgcagcgtgtgaagtgtgtggg
tcccgtggcaggggagccgaaatgcttatatgcggtgatgaaagtggtactcgcggatgt
ggtgttggtacccacattgactgccttgatcctccgcttgaggccgtgccagaggaagac
tggttctgcctcgactgctgccggaaaactggcagccggagttcaaagaaacgagccaag
aaatcgaagaagtga
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