Salvia miltiorrhiza (redroot sage): 131000430
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Entry
131000430 CDS
T09291
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131000430
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131000430
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
131000430
NCBI-ProteinID:
XP_057782319
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Position
1:complement(60528217..60534786)
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AA seq
437 aa
AA seq
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MAVSLKIIELLAFLTLLLLANVIAHTDSIEEIQKLKSIRNSTMAERLEEFKHDDAVDDPE
AVADMVYMATRNSTERRKLGFFSCGTGNPMDDCWRCDRNWMRNRRRLADCAIGFGRNAVG
GRDGRYYVVSNPADDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTID
GRGANVHIANGGCITIQFVTNIIIHGLHIHDCKRTGNAMVRSSPSHYGWRTMADGDGISI
FGSSHIWIDHNSLSSCTDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYARDRVMQV
TIAYNHFGIGLIQRMPRCRHGYFHVVNNDYTSWQMYAIGGSADPTINSQGNRYLAPTNPF
AKEVTKRVTNLGDRRWRHWNWRSEGDLMLNGAYFRPSGRGAAASYARASSLAAKSSSLVA
TLTSTAGALRCRRGMAC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctctgaaaatcatcgagcttttagcatttctcactctactgttgcttgcc
aatgtaattgctcacacagatagtattgaagaaattcagaagctgaagagcatcagaaac
tcaactatggcggaaaggttggaggaatttaagcacgatgacgctgtagacgatccagaa
gctgtcgcagacatggtttatatggctacccgaaacagcaccgagcgaaggaagctagga
ttcttctcatgcggcacgggtaacccgatggacgactgctggcggtgcgaccgcaactgg
atgcgcaaccgccgccgcctggccgactgcgccatcgggttcgggcgcaacgcagtgggc
gggcgcgacgggcgctactacgtggtgtcgaacccggccgacgacgacccggtgaacccc
cggccgggcaccctccggcacgccgtgatccaggaccggcccctgtggatcgtgttcaag
cgcgacatggtgatcacgctcaagcaagagctcatcatgaacagcttcaagaccatcgac
ggccgcggcgccaacgtccacatcgccaacggcggctgcatcaccattcagttcgtcacc
aacatcatcatccacggcctccacatccacgactgcaagcgcaccggcaacgccatggtc
cgcagctcgccctcccattacggctggcggaccatggccgacggcgatggcatctccatt
tttgggtccagccatatttggatcgatcataactccttgtctagctgcactgatggcctc
attgatgccatcatgggatccactgccatcaccatttccaacaactatttcactcaccat
aatgaggtgatgttgttaggccatagcgattcgtatgctcgagacagagtgatgcaggtc
accatcgcctacaaccatttcggaatcggcctcatccagaggatgcccaggtgcagacat
gggtatttccatgttgtaaacaatgactacacatcttggcagatgtatgccataggtggg
agtgctgatcccaccatcaacagccagggcaacagatatttagccccaaccaaccctttt
gccaaagaggtcaccaagagggtaaccaacttaggcgaccgcagatggaggcactggaac
tggagatccgagggcgatctcatgctcaacggagcctatttcaggccctctggccgtggc
gctgcagccagctacgccagggcttccagcctcgcggctaagtcttcgtccctggtcgcc
acgctcacctccacagccggtgcacttcgctgtcggaggggcatggcatgctga
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