Salvia miltiorrhiza (redroot sage): 131000501
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Entry
131000501 CDS
T09291
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131000501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131000501
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131000501
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_14
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
131000501
NCBI-ProteinID:
XP_057782415
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Position
8:complement(6758689..6761967)
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AA seq
582 aa
AA seq
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MAYSFPEEVLEHVFSFLSSDRDRNAVSLVCKSWYEIERWCRRRIFVGNCYAVSPEIVIRR
FPELRAVEMKGKPHFADFNLVPEGWGAYLYPWIAAMAEAYPFLEEIKLKRMVVTDESLEL
ISKSYKNFKVLVLSSCEGFTTDGLASIAANCRHLRELDLRESEVEDLSGHWLSHFPDSCT
SLVSLNMSCLGSEVSFSALERLVARSPNLRTLRLNRAVPLEKLANLIRRAPQLVELGTGA
YSAEIRSDTFSNLADAFSACKQLKALSGFWDVVPSYLPAVYSVCSGITSLNLSYAAIPSS
DLVKFICQCQNLQRLWVLDYIEDSGLEALAASCKDLQELRVFPSDPFGAEPNVSLTEQGL
VSVSEGCPKLESVLYFCRQMSNAALIAIARNRPNFIRFRLCIIDPQAPDYLTLEPLDAGF
GAIVENCKELRRLSMTGLLTDRVFKYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSLSFGACKLLAQKMPRLNVEVIDERGPP
DSRPESCSVERVYVYRTVASRQRLDMPEFVWTMDEDSSLRYS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaagttttggagcacgtgttctcgttcctgagctccgac
agagaccggaacgccgtctcgttggtgtgcaagtcgtggtatgagattgagcggtggtgc
cgccgccgcatattcgtcgggaactgctacgctgtatcaccggagatcgtgatccggcgg
tttccggagctgagggctgtggagatgaaggggaagccgcatttcgcggatttcaatctc
gtgccggagggctggggcgcctacctgtacccttggatcgcggcgatggcagaggcgtat
ccgttcctggaggagatcaagctgaagcgcatggtggtgacggacgagagcttggagctg
atctccaagtcgtataagaatttcaaagttctcgtgctgtcgtcttgcgagggtttcacc
acggatggtctcgcctcgattgcggctaattgcaggcatctgagggaactagatttgagg
gagagtgaagtagaggacctcagtgggcattggcttagccattttcctgatagctgcact
tctctggtgtcacttaacatgtcttgtctaggttctgaggtaagtttctcagccttggag
cgacttgttgcacgttcccctaacctgaggactctccgtctgaaccgtgctgtgcccctt
gagaagcttgctaacctgattcgccgtgccccccaattagttgaattaggtactggtgcc
tattcagctgaaattcgatctgatacgttttcaaacctggctgatgcattttcagcctgt
aaacaactcaaggctttgtctggtttttgggatgtggttccttcttatttaccagctgtg
tattctgtctgttctggaatcacttcgctgaatttgagttatgctgccataccgagttct
gatcttgtcaagtttatttgccaatgccagaatttgcagcgtctttgggttttggattac
atcgaagacagtggactggaagctcttgctgcatcttgcaaggatctgcaagaacttagg
gtctttccttccgatccttttggagcagaacctaatgtgtctttgacggaacaagggctt
gtatctgtctccgaaggctgccccaagcttgaatctgttctttacttctgccgccagatg
tcaaatgccgcattgattgctattgcaaggaatcggcctaattttattcgattccgactc
tgtatcattgatcctcaagctcctgactacttaaccctcgaaccacttgatgctggtttt
ggggccattgtggagaactgcaaggagctgcgccggctttccatgacgggcctcctcact
gatcgtgtcttcaaatatatcgggacccatgccaagaaattggagatgctttcaatagcc
ttcgctggggatagtgacttgggcctccaccatgttttatctggttgcgacagcctccgg
aaacttgagataagggactgtccatttggggacaaggctctcttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgctccctgagtttcggagcttgtaag
ctgctcgcacagaagatgcctaggctcaacgttgaggttatagacgagagaggcccaccc
gattcaaggcctgaaagctgctctgttgagagagtctatgtctaccgcactgttgcttcc
aggcaaaggctcgacatgcctgaatttgtctggactatggatgaagattcatccctgaga
tattcctag
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