Salvia miltiorrhiza (redroot sage): 131000533
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Entry
131000533 CDS
T09291
Name
(RefSeq) cell division cycle protein 48 homolog isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131000533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131000533
03009 Ribosome biogenesis [BR:
smil03009
]
131000533
04131 Membrane trafficking [BR:
smil04131
]
131000533
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smil04147
]
131000533
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131000533
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131000533
Membrane trafficking [BR:
smil04131
]
SNARE
SNARE associated proteins
Others
131000533
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131000533
Exosome [BR:
smil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131000533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
AAA_18
IstB_IS21
ABC_tran
Parvo_NS1
Viral_helicase1
ATPase_2
AAA_7
Vps4_C
NACHT
ResIII
AAA_lid_PRS2_C
TsaE
NB-ARC
Zeta_toxin
DUF815
Sigma54_activ_2
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
131000533
NCBI-ProteinID:
XP_057782482
LinkDB
All DBs
Position
8:7239215..7243948
Genome browser
AA seq
804 aa
AA seq
DB search
MSHQAESSDSKGGKKDFSTAILERKKAANRLVVDEAVNDDNSVVSLHPATMEKLQLFRGD
TILLKGKKRKDTVCIALADDTCEEPKIRMNKVVRTNLRVRLGDVVSVHQCPDVKYGKRVH
ILPLDDTIEGLTGDLFDVYLKPYFLEAYRPVRKGDHLLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLSEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGTSNPSALRETVVEVPNCSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKRGAN
PDSMDEDVEEVSEIRPSHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAEQ
PAGAAASDPFASSAGAADEDDLYS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaccaggccgagtcgtctgattcgaaaggtgggaagaaggacttctcgacggcg
atcttggagaggaaaaaggccgcgaatcgtctggttgtggatgaggctgtcaacgatgac
aattctgtcgtctccctccaccccgccaccatggaaaagctccagcttttccgcggggat
actattttgctcaaggggaagaaaagaaaggatactgtctgcattgcccttgctgatgat
acatgcgaagagccgaaaattaggatgaacaaggttgtgaggacgaacctgagggttcgg
cttggggatgttgtgtctgtgcaccagtgcccagatgtgaaatacgggaagcgtgtccac
attttgccgttggatgatacgattgaaggtctaactggagatcttttcgatgtatatctg
aaaccgtactttttggaagcatatcgcccagtgaggaaaggtgaccatcttttggttaga
ggggggatgagaagcgtggaatttaaagtcattgagactgatcctggagagtattgtgtt
gttgcccctgatactgagatcttttgtgaaggggagcctgtgaggcgagaggatgaggat
agattggatgaggtgggttacgatgatgtaggtggtgttaggaagcaaatggctcagatt
cgtgaattagtagaattgcccctgaggcacccacagctcttcaagtctattggtgtcaaa
ccaccgaaaggaattttactctttggacctccaggttcaggaaagactttgatagcaaga
gctgttgctaatgagactggtgcatttttctttttgattaatggccctgaaattatgtcc
aagctggctggagagagtgaaagcaacctaagaaaagcatttgaggaggctgagaagaat
gccccatcaattatttttattgatgaaattgattccatagcacctaagcgagagaagaca
cacggtgaagttgaaaggaggattgtttctcagctgctgactctcatggatgggttgaaa
tctcgtgcccatgtcattgttatgggggctactaatcgacctaacagcattgacccagct
cttagaaggtttggtagatttgatagagaaatagacattggtgtccctgatgaaattggg
cggctggaggttctgaggattcacaccaagaatatgaaactttctgaagatgttgattta
gagaggattgctaaggacacccatggctatgttggtgctgacctagcagctctctgtact
gaagcagcgcttcagtgcatcagagagaaaatggatgtcattgatttggaggatgattca
attgatgctgagatactaaactccatggctgttacaaatgaacacttccacactgctctt
ggaacaagcaacccctctgctttgcgggagactgttgttgaagtgccaaattgcagctgg
gaagatattggagggctagaaaatgtcaagagggagcttcaggagactgttcaatatcct
gtggaacatccagagaagtttgagaaatttggtatgtccccttcaaagggtgttcttttc
tacggtcctcctggatgtggaaaaactctgctagctaaggctattgcaaatgaatgccaa
gccaatttcattagtgttaaaggacctgaattgcttaccatgtggtttggagagagtgaa
gccaatgttcgtgaaatatttgacaaggctagacagtctgctccatgtgtcctcttcttt
gatgagcttgactccattgctacacagagaggtagcagtgttggagatgctggtggtgcc
gctgaccgagttctcaatcagcttctcactgagatggatggcatgaatgccaaaaagact
gttttcattattggggctactaacagacctgacattattgatccagcacttctacggcca
ggtcgtcttgatcagttaatatacattcccctgccagatgaagattcacgccatcagatc
ttcaaagcatgtcttaggaagtcaccactgtccaaggatgttgatctccgagcccttgct
aaatatactcaaggatttagtggagcagatatcaccgaaatatgtcagagggcttgcaaa
tatgccataagagagaatattgagaaagacatagagagggagaggaaaagaggggcaaat
cctgattcgatggatgaggatgttgaagaagtatcagaaatcaggccttcacattttgag
gagtccatgaaatatgctcgcaggagtgtgagtgatgctgacatacggaaataccaggca
tttgcccagaccttgcagcagtcgcgtggttttggaactgaattccgttttgctgaacaa
ccagctggggctgctgcatcagacccgtttgcatcatctgctggtgcagctgatgaagat
gatttgtatagttag
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integrated database retrieval system
