Salvia miltiorrhiza (redroot sage): 131000974
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Entry
131000974 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131000974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smil03036
]
131000974
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
131000974
SWR1 complex
131000974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
HDA2-3
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
131000974
NCBI-ProteinID:
XP_057783111
LinkDB
All DBs
Position
1:complement(61012454..61025703)
Genome browser
AA seq
2037 aa
AA seq
DB search
MASKGPRSKLDHESRAKRQKALEAPKEPQRPKTHWDHVLEEMAWLSKDFESERKWKLAQA
KKVAIRASKGMLDQATRGEKRVKEEEQKLRKVALNISKDVKKFWIKIEKLVLYKHQLELD
VKKKKALDKQLEFLLGQTERYSSMLAENLVNPPSLCKPSYLCNAEANPSTSERRGGESDN
GSQSDIQAADEDYDLQSSEESEDDERTVDADEALITKEEREEELAALQSEIDLPLEEILK
RYAAHEGSRGKSPEKDDDKPGTPEHNELNGKEDTMGDAPVIEKGSSPAKPGRRCVESNGV
LSASENHCPLAENYEKRSSLKKLLESEKQISHEFSDEQEDDDFVLSAREENEYDMDDETT
LVEEEELANAEPVNTADEIVLLQKESEVPIEELLARYKKDCDSGDIDDDSGSLSTSDSEE
LLDSPEHGKSVTKQPDDESNGLELDICSHPEEEAECLGKSGEETQSENIIADAAAAARSA
QPTGNTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI
ALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERRIKRQGWLK
PNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT
GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPISVMVEGQEKVNKEVVDRLHNVLR
PFLLRRLKRDVEKQLPSKHEHVIYCRLSRRQRNLYEDFIASSETQATLANGNFFGMISVI
MQLRKVCNHPDLFEGRPIVSSFDMRGIDMQLSSSVCSMLAPGPFTTVDLNGFGFVFSHLD
FFMTSWESEEIHNIATPSSLIQQRVTLSSLEDNWIRCKKKNNMHSTNIFDEIQKALLDER
LREMKERAAAVAWWNSIRCRRKPIYATGLRELVSVKHPVHDIHHQKHNPLSYLYSSKLAD
IVLSPVERFEKMADQVGSFMFAIPAARAPPPVSWCSKGGSPVFIHHTFKDRWSQVFSPLL
TPFRPAIVRRQVYFPDRRLIQFDCGKLQELAVLLRRLKSEGHRALIFTQMTKMLDVLEAF
INLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDS
DWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGSYNT
EFFKKLDPIELFSGHGTVSQKDTPLEKTSKNCDEMTLSCVDLEAALKNAEDEADYMALKR
VEEEEAVDNQEFTEEAVGKLEDDELANEEEMKLDGPAEQTALIVKSDEGNVVSESHPVEG
GALAFQNNEDDVDMLADVKQMAAAAAAAGQAILSFENQLRPIDRYAVRFLELWDPIIDKT
AVESNTQIEEAEWELERIEKLKDDMEAEIDDDEEPLVYENWDADFATEVYKQQVEALAQH
QLMEDLEREAQEKEALECGNSDSQRDDITPKPKPKKKGKKAKFKSLKKGSLVSKSISVKE
ESSLEPTSIDDDLMYDDTVTSSDALSPCSTQEKKRKPTSDDEEQRSRKKSKKLKASEARN
IVLYHKSSGKHQDELKDLKICDNGFFDSEKQISRNKVRGKLSIPIMPLKRVFTIKPEKLK
KKGNIWSKDFLPSPDLWSPKEDAALCAAIHEYGPNWNLASEILYGMSDGGSYRGRFRHPV
HCSERLRELIQRYVLSVNDVTNNDKAVGVGTGKGPLRVTEDNIRVLLGITSELPDHEPLL
QKHFFAVLSAAWRNLSRSSHRGNALLSQNGFYSSGKLFASTSNKNSLEKSSERLGFSNLH
QCGKLVASALNSSHSLQTDDRLPVINHREDTPMEKESLDLTLELERDRVEALPLPSVINV
SIPGTDPSTSFKVHSGEDQHFKSSRGSVESQFRTASAAHFDSCFGEQSQVLTMGDNRSCN
PQLPYSGKTKLPVSESVKPSKSKSRRASKDHTDSQHLTSTEVFQNLPLMPTDPSLRFDDS
SSSFSEVGILGFDRHSLLGMDEGSPSDMTGLVLSNYEPDLTSGLDDLSNFPEFTDIG
NT seq
6114 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaagggtccaaggtctaaacttgaccatgaatcgcgggctaagcggcagaag
gcccttgaagccccaaaagaacctcaacgtcctaaaacacattgggaccatgtcctggaa
gagatggcctggttgtcaaaggactttgagtcagagaggaaatggaagctggctcaggca
aagaaagttgctatacgggccagcaagggcatgcttgatcaggccacaagaggggagaag
agagtaaaggaagaggagcagaagttgagaaaagttgccctcaatatttcgaaggatgta
aagaaattctggataaaaatagagaagctggtattatacaagcatcaattagagcttgat
gtgaaaaagaagaaagctcttgataaacagcttgagttccttcttggacaaactgaaagg
tactcatcaatgctggctgaaaatcttgtcaatccaccgagtctttgcaaaccatcttac
ttgtgcaatgctgaagcaaatccgagtacttctgagagaagaggtggtgaatcagataat
ggatcccagtcagatatccaagctgcagatgaagattatgatttgcaatccagcgaagaa
tctgaagacgatgagcgtactgttgatgcggatgaggctctcatcactaaagaagagcgg
gaagaggaattggcagcattacaaagtgaaattgatttacctctggaggagatactgaaa
cgctatgctgcccatgaaggcagcagaggaaaaagtcctgagaaggatgatgataaacct
ggaacacctgagcataatgaacttaatggaaaagaagataccatgggagatgcccctgtg
atagagaaaggcagctcacctgcgaaacctggtcgtcgttgtgttgaaagtaatggtgtt
ttgtctgcatcagaaaatcattgccccttggctgaaaattacgaaaagagaagttctttg
aagaaacttcttgagtcagagaagcagatctcacatgaattcagtgatgaacaagaagat
gatgattttgtactctcagccagggaagaaaatgaatatgacatggatgatgagacaacc
cttgtggaggaagaggaattagcgaatgcagagccagtcaatactgcagatgagattgta
cttctccagaaggaaagtgaagttcctatagaggaactgcttgcaaggtataagaaggat
tgtgacagtggagatatagatgatgactctggatccttgtccacttctgattctgaggag
ttattggattcaccagaacatgggaagtctgtcactaagcagcctgatgatgaatctaat
ggattagagcttgatatatgctcccatccagaagaagaagctgaatgtttggggaaatct
ggagaagagacgcaaagtgaaaatataattgctgatgcagcagcagctgctaggtcagca
caaccaactggtaatacattctcgacgacaaaagtgcgaacaaagttcccttttcttcta
aagtatcccctgcgtgagtatcagcatattggtttggattggcttgtgaccatgtatgag
aagagactgaatggaatccttgctgatgagatggggttggggaagacaattatgaccatt
gcgctgcttgctcatctagcttgtgagaaaggaatttggggtccacatctcattgtcgtt
cctactagtgtcatgctcaattgggagactgagtttcttaaatggtgtcctgctttcaaa
atattgacatactttggaagtgcaaaagagcggagaataaagaggcaaggatggttgaaa
cctaattcatttcatgtttgcattacgacttataggctcgtcatccaggattcaaaggtt
ttcaagaggaagaagtggaagtaccttattttggacgaagctcatctaataaagaattgg
aagtcacaaaggtggcagacgttactcaattttaactccaagaggcgtattctactaact
ggtacaccattacagaatgatcttatggaactttggtctctgatgcatttcttgatgcca
catatttttcaatctcaccaagaatttaaggactggttcagtaatcctatatctgtcatg
gtagagggacaagagaaagtaaacaaagaagtagttgaccgattgcataatgtactccgt
cctttcttacttcgccgattgaaaagggatgtcgagaaacagcttccttctaagcatgaa
catgttatatactgtaggctgtcaaggaggcagcgtaacttatatgaggactttattgct
agttccgagactcaggctactctagctaatggtaatttttttggaatgatcagtgttatt
atgcaacttcgtaaggtctgcaatcatcccgatctatttgaaggccgtccaattgtcagt
tcttttgatatgcgtggtatagacatgcaacttagctcttctgtttgctcaatgcttgcc
cctgggccatttacaactgttgaccttaatggctttggatttgtcttctctcatctggat
tttttcatgacatcttgggagagtgaagaaatccataatattgctacaccttcaagcttg
atacagcaacgtgtaaccctgtctagtttggaggataattggatcagatgcaagaaaaag
aacaatatgcattcgacaaatatatttgatgagattcaaaaggcactattggatgagaga
ttgagagaaatgaaagagcgtgcagcagctgtggcatggtggaattctataaggtgcagg
agaaaacccatatatgccactggcctcagggagcttgtcagtgtcaagcatcctgtccac
gatattcatcatcagaaacacaatcctttgtcatatctgtattcgtccaagcttgctgat
attgtgctttcacctgttgaaagatttgaaaagatggctgatcaggttggaagtttcatg
tttgcaatacctgctgcacgtgcacctcccccagtttcctggtgcagcaagggtggatca
cctgtgtttattcaccatacatttaaagacagatggtcacaagttttttcccctcttctt
actccatttaggcctgctattgtccggaggcaagtttactttccagatagaagacttatc
cagtttgactgtggtaagctgcaggagcttgcagttttgctccggcgacttaaatccgag
ggtcatagggctctgatatttacccaaatgacaaagatgcttgatgttttggaggcattc
atcaatctttatggttacacctacatgcgtctagatggttccactcagcctgaagagagg
cagacactcatgcaaaggtttaatacaaatccaaagatatttctttttattttgtcaaca
cggagtggaggtgtaggcatcaacctagttggagcagacactgtgattttctatgatagt
gactggaatcctgccatggatcaacaggcacaagataggtgtcacaggataggccagaca
cgtgaagttcacatatataggttgataagtgagagcaccattgaagagaatattctcaaa
aaggccaatcagaagcgtgctctggatgatttagttatacaaagtggaagctacaataca
gaattctttaagaaactggatccaatagaattgttttcaggccatggaacagtttcccaa
aaggatacaccactagagaaaacatccaagaattgtgatgagatgacattatcttgtgtg
gatttggaagctgccttaaagaatgctgaagatgaggcagactacatggcgctaaagaga
gttgaagaagaagaggctgtagataatcaagagttcactgaagaagcagttggaaagttg
gaggatgatgagctagccaatgaagaggaaatgaagcttgatggtcctgccgaacagact
gctttgattgtaaaatcagatgagggcaatgttgtgagtgaaagtcatccagttgaggga
ggggcccttgcttttcaaaataatgaagatgacgtagatatgctagctgacgtcaaacag
atggctgcagctgcagctgcagctggacaggctatcttgtctttcgagaatcagttacgc
ccaattgatcgatatgcagtacgctttcttgagttgtgggacccaattattgacaagact
gcagttgagtccaatacgcaaattgaggaagctgaatgggagttagagcgcattgagaag
ttaaaggatgatatggaggccgagattgatgatgatgaagaaccgttggtgtatgaaaat
tgggatgctgattttgcaactgaagtatataaacagcaagttgaagcattagcacaacat
cagttgatggaagatctggaacgtgaagcccaggagaaagaggctttagagtgtggtaat
tcagactctcaaagggatgacattactccgaaaccaaaaccgaaaaagaaaggcaaaaag
gccaagttcaaatccttgaagaaaggatctctagtttcaaaatccatttctgtaaaagaa
gagtcatcattagagcctacgtctattgatgatgacttaatgtatgatgacactgtgaca
tcttcagatgctttatcgccctgttcaactcaagagaagaaacgtaaacccacttcagat
gatgaagaacagagaagcagaaagaagtctaaaaagttgaaggcttctgaagctaggaac
attgttttatatcacaaatcttctggaaagcatcaagatgaacttaaagacttgaagatt
tgtgataatggtttctttgatagtgaaaaacaaataagtagaaacaaggtgcgaggaaag
ctttctatcccaatcatgcctctgaaacgggttttcacaataaaaccagaaaagttaaaa
aagaaggggaacatttggtctaaggatttcctcccttctcctgatctttggtcgccaaag
gaagatgccgcgttatgtgcagctatccatgagtatggtccaaattggaatttggcaagt
gaaatcttgtatggaatgagtgatggtggatcttatcggggcaggtttcgtcatcctgtc
cattgctctgagaggcttagggagctaatccaaagatatgttttatcagttaacgacgtt
acaaataatgacaaagctgttggtgttggtacagggaagggtccgcttagagtaactgag
gataacatccgggtactgcttggcattacttctgaattacctgatcacgaaccgcttctt
cagaagcatttctttgcggtgctttctgctgcttggaggaatctctcacgctccagccac
aggggcaatgctctattatctcagaatggattctattcgtcgggaaagttgtttgcctcc
accagcaataagaattccttggagaaatcatcagagaggctgggattctctaatttgcat
cagtgtgggaaattagtagcatctgctctgaatagtagccacagccttcaaacagatgac
aggttacccgtcatcaaccatagggaggatactcccatggaaaaggagagcttggattta
acgcttgagcttgaacgagatagggttgaagctctacctcttccctctgtcattaatgtt
tcaattcctggcacagacccatccacctctttcaaggtgcattctggggaggatcagcat
tttaaatcttccaggggctcagttgagagtcaattcagaactgcatcagcggcacatttt
gacagttgttttggggaacaatctcaagtattaaccatgggtgataacaggtcttgtaat
ccacaattaccatattcgggaaaaaccaagctccctgtttctgagtcagtcaagccttct
aagtcgaagtcgagaagagcaagtaaagatcacactgactcgcaacatctaacttctaca
gaagtattccaaaatctgccattgatgccaactgaccccagtctgaggtttgatgattcg
tcatcctccttttctgaagttggaattcttggatttgacaggcacagcctgctcggcatg
gatgaaggttctccctcggacatgacagggctggtcttgtccaactatgagccggactta
acatctgggctggatgacctgtcaaacttccctgaatttacggacatagggtaa
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integrated database retrieval system
