Salvia miltiorrhiza (redroot sage): 131001245
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Entry
131001245 CDS
T09291
Name
(RefSeq) pre-mRNA-processing factor 19 homolog 1-like isoform X1
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03040
Spliceosome
smil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131001245
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131001245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
131001245
04121 Ubiquitin system [BR:
smil04121
]
131001245
03400 DNA repair and recombination proteins [BR:
smil03400
]
131001245
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131001245
Spliceosome [BR:
smil03041
]
Complex B
Other components
Prp19 complex
131001245
Complex C
Prp19-CDC5 complex
131001245
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
U-box type E3
131001245
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
131001245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp19
U-box
zf-Nse
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
131001245
NCBI-ProteinID:
XP_057783561
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All DBs
Position
8:14242996..14248654
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AA seq
276 aa
AA seq
DB search
MHCSISGELPDEPVLSKKSGLLFEKHLIELFILDHGKCPVTEEPLTMDDIIPIKTGKLCT
FKSAIKICLQIAKPRPVQAASIPGMLGMFQIEWDGLMLSNYALDQQLHSASPRQELSHAL
YQYDAACHVARMKKERDEARVLLAQAERRIPASVEVPNTVNAVAISNGKRGAEDDELGPN
AKRMHPGISTSIISELADYNALLSQQRKKRQIPSTLAPIDAVERYTQLTVNPLHKTNKPG
ILSLDIQYSKKRVALTNFSNKCTRSGTLIPGRDQLI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcattgctcaatttccggcgagttgccggatgaacccgtcttatccaagaaatccggc
ctcctcttcgagaagcacttaattgagctcttcattttggatcatggaaaatgtccagtt
actgaagagcccttgacaatggatgatatcattcccatcaagactggaaagttatgcact
ttcaaaagtgcgattaagatatgtttgcagatagcaaagcctcgaccggtgcaggctgca
agtattcctgggatgcttggaatgtttcagattgaatgggatggtttaatgctatctaat
tacgcactggaccagcagttgcatagtgctagccctaggcaggagctaagtcatgcccta
tatcagtatgatgctgcttgtcatgttgcaaggatgaagaaggaaagggatgaagcaaga
gtattactggcccaagctgaaagacggataccggcatcagtggaagtaccaaatacagtg
aatgctgtagctataagcaatgggaaaagaggagctgaggatgatgagcttggtccaaat
gcaaaaagaatgcatcctggaatctcaactagcatcatttctgagctggcagattataat
gctttactttcacaacaaaggaaaaagagacagataccttcaacattggctcctattgat
gctgtggaaagatacactcaattaactgtaaatcctcttcataaaaccaacaagcctggc
atattgtctctagacatccagtattccaagaaacgtgttgcactcaccaacttctcgaat
aaatgcacaagaagtggaaccctaattcctggaagagatcagcttatatag
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