Salvia miltiorrhiza (redroot sage): 131001387
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Entry
131001387 CDS
T09291
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131001387
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131001387
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GFIT
Motif
Pfam:
CBM-like
Rhamnogal_lyase
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
131001387
NCBI-ProteinID:
XP_057783748
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Position
8:15828080..15830948
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AA seq
522 aa
AA seq
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MVRGVSGFYSYAIFEHLENWPDLNIDESRIAFKLDDNMFNYMAISEQKQRVMPTSRDRDA
GRVLAYKEAVVIRNSSDPSLNGEVDDKYQYSCDNKDNHVHGWIASSQHPHIGFWVITPSD
EIRVGAPIKTDLTSHAGPIALAIFFSNHYMGPDFGVKLRGGEHWKKVLGPVFIYLNSDSA
TNHRTLWRDARNQMLRETKKWPYDFPSSEDFPNATQRGQIRGCLLLYDDYISTHLIPARS
AYVGLAPPGDDGSFQDDSKGYQFWTRADKKGFFTIQHVRAGTYNLYAWVPGVIGDFKYEE
DIVIIPGSKIEIGDIVYNPPRSGPTLWEIGVPDRTAFEFYVPDPAPHLINKLYINHTEKY
RQYGLWDRYKDLYPNNDLIYTVEDSDYRKDWFFAHVTRKTSNNTYEPTTWQILFNLTNIN
NVGDYTLRIALASATMANIQIWINEPNTSKPHFSTGRIGRDNAIARHGIHGKYWVYGVDI
AGSQLVEGKNTIYLKQATGKTPFAGVMYDYIRLEAPSQQDYY
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcggagtttcagggttctactcgtatgcaatatttgaacacttggaaaattgg
cctgacctcaacatagacgaatcaagaatcgcattcaagcttgatgacaacatgttcaat
tacatggcaatttcggagcagaagcagagggtgatgcctacaagcagggacagagatgca
ggtagggttcttgcttacaaagaagcagttgtgataagaaacagcagtgatcccagcctg
aatggtgaggtagatgacaagtatcaatactcatgcgacaacaaggacaaccacgtgcac
ggatggatcgcctcctcccagcatccccacatcggattttgggtcataacgcccagcgat
gaaatccgagttggtgctcccatcaaaaccgatcttacttcccatgctggtccaattgcc
ttagctattttcttcagtaaccattacatgggaccggattttggcgtgaaattacgcggc
ggagagcattggaagaaggtgttgggccccgttttcatatacctcaactccgattcagcc
actaatcatcgcactctctggagagacgcaagaaaccagatgttgagagagacaaagaaa
tggccgtatgatttcccatcatctgaggacttccctaatgcaacacaacgaggacaaatc
cgcggctgcttgctcctctacgacgactatattagcacccaccttatcccagcaagatcc
gcatatgtcggattggctccccctggagatgacggatcttttcaagatgattctaagggc
tatcaattttggacacgagctgataaaaaagggttcttcaccatccaacatgttcgagca
ggaacttataatttgtacgcttgggttccgggagtaataggggactttaaatatgaagag
gatattgtcataattccaggtagtaagattgaaataggtgatattgtgtacaaccctcca
agaagcgggcccactctatgggaaatcggtgttcctgatcgaactgctttcgagttctac
gttccagatcctgcccctcaccttattaacaagctatacattaaccacactgaaaagtac
agacagtacggcttatgggacagatacaaagatctttatcctaacaatgatctgatttat
actgtcgaggatagtgattatagaaaagactggttttttgcccatgttacaaggaaaaca
agcaacaatacatatgaacctacaacatggcagattttatttaacctgacaaatattaat
aatgttggagactatacgctcaggattgccctagcatctgctaccatggcaaatatacag
atatggatcaacgagccgaatacaagcaagccccatttctcaacggggcgaataggcaga
gacaacgcaatagcaagacatgggattcatggaaagtattgggtgtacggtgtggatata
gcaggatctcaacttgtggaagggaaaaacaccatctatcttaagcaagcaacgggcaaa
actccttttgctggagttatgtacgattatattagactggaagcgccctctcaacaagac
tattattag
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