Salvia miltiorrhiza (redroot sage): 131001496
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Entry
131001496 CDS
T09291
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smil01002
]
131001496
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131001496
Enzymes [BR:
smil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131001496
Peptidases and inhibitors [BR:
smil01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131001496
Ubiquitin system [BR:
smil04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131001496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
131001496
NCBI-ProteinID:
XP_057783867
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All DBs
Position
8:17224452..17231730
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AA seq
937 aa
AA seq
DB search
MLVIVGILLLFGLVVRHKWRNGAAKKEAILRLVAVASEEEAQIAKLQAVEQYNSQHVEYT
PQPSNTQQLEAQHFCAVCRCPTTTRCSRCKAVRYCSGKCQIIHWRQGHRDECQPAVALYA
TKKSEYVVETAPENQFTMHLKNESKICSDPSNDCDDSGSSGSSTSSFFSSTDQSEASADA
STNEDVECRPALALHARMKSDFVVETAPEFAMHLKDEIKISDPSEECDDSGSSGSSVSCF
LSSTKQSEMCFDASTDEHVKLGTPTRPDKAPSTGIDSYISETVPYFGDANVLRTSHPGYL
VNKIEKTPASKIDESLTSTNLKDKRKGGGVAVIEEFVPAKSELGSPQSTSSARTSSTGDW
ENLVQTSTSRVMRSKSAKTSGNNEVQNIDLSSEYLKSSKLPQSHEYRKTELCNGKETRSV
TMSTSSGDCQKMHTNADSPQAISLETEGVRILSQSTGKGLKTSVRKLAQHFRVPKQTKSY
TIDMVKDFGDNHNHKVIFSFKIFMQLYTSDNVGLHPFGLANCGNSCYANAVLQCLIFTRP
ITSYLLQGLHSKTCRKRDWCFICKFEHLIQKGQVTNSPLSPVGLLSHIQPIGREEDAHEF
LRNVVDKMQSICLEEAGVSGSFTEDSTLMGLTFGGYLRSKIKCMKCLGRSEQHDRMLDLT
VEIDGDIYTLEQALAQFTSSETLGGDDKYKCNRCKSYEKAKKKLTVLEAPNVLTVVLKRF
RSGNFEKLSKLIRFPEVLNLLPYMSGMGDKYPIYHLYAVVVHLGVMNGVYSGHYVSYVKN
FQGHWFRIDDSRVSRVDLETVLSEEAYILFYARHSPRGASFVRNSNMYSDGKTKKNMEAI
PSSNNSKKKTLKTKLSSSARSAAHWMSPNDFSGSPMGDPEDWEFQVQQHKNHIVDSSSDS
SSIFSTSDAGSYSTDSTKDSSAEDLSGYLFGSNWYHP
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgctagtaattgtcggtatattactgcttttcggtcttgtagttcggcataagtggcgg
aatggggcggcgaagaaggaggcgattctgaggctggtggccgtcgcctcggaagaagaa
gcacaaattgctaagctacaagctgttgagcagtacaattctcagcacgtagagtacacg
ccgcagcccagtaatacgcagcagctcgaagcgcagcatttttgtgccgtttgtcgttgc
cccaccaccactaggtgttctaggtgtaaagctgttagatactgttctggtaagtgccaa
ataattcattggagacaaggccatagagatgagtgccagccagcagttgcattgtatgct
acaaagaaaagtgaatatgttgtggaaacagcaccagaaaatcagtttactatgcatttg
aaaaatgaaagtaaaatttgttcagatcccagcaatgactgtgatgattcaggatcctca
ggtagctcaacgtcttccttcttttcttccactgatcaaagtgaagcatcagctgatgct
tctactaatgaggatgttgagtgtcggccagctcttgcattacatgcaagaatgaaaagt
gattttgttgtggaaacagctccagaatttgctatgcatttgaaagatgaaattaaaatt
tcagatcccagtgaagaatgtgatgattcgggatcttcaggtagttcagtatcttgcttc
ttgtcttctaccaaacaaagtgaaatgtgttttgatgcttccactgatgagcatgtcaag
ttaggaactcctaccaggccagataaagcaccttctactggaattgattcatacatctca
gaaactgttccctactttggtgatgcaaatgtactacgtacatctcatcctggttatttg
gttaacaagattgaaaagacacctgctagtaagattgatgaaagcctcacgtcaactaac
ttgaaagataaaagaaaaggaggtggggttgctgtgatagaagaatttgtacctgctaag
tctgagttgggaagtccacaatcaactagttctgcaaggacatcttcaactggtgattgg
gaaaatctagtgcagacatccaccagtagagtaatgagatcaaaatctgctaagacttca
ggcaataatgaagtgcaaaatatagacctgagttcagaatacttaaaatcttcaaagttg
ccacaatcccatgaatacaggaaaactgaactttgcaatggaaaggaaacaagatctgtg
acaatgtctacaagttcaggggattgtcagaagatgcatacaaatgctgatagccctcag
gctatttctttagagactgaaggtgttcgaattttgtcacaatctactggtaaaggtctg
aaaacatctgtacggaaacttgcacaacattttcgagtgcccaagcagacaaagtcctat
accatagatatggtcaaggatttcggtgacaatcataaccataaggtcatattttccttc
aagattttcatgcaattatacacttctgacaatgtgggacttcatccgtttggtcttgct
aattgtggaaatagttgctatgctaatgctgtgctgcagtgcctgattttcactcgaccg
attacttcatatcttcttcaagggctgcattcaaaaacatgtcggaagagggactggtgc
tttatctgcaagtttgaacatctgattcaaaagggacaagtaactaattctcctttgtcc
ccagttggattactgtcccatatacagccaattggaagagaagaagatgcacatgagttt
ttgagaaatgtcgtcgacaaaatgcaatctatatgtcttgaagaagctggggtttctggt
tcattcactgaagattcgacccttatgggtctgacttttggtggttatcttcgatcaaag
attaagtgcatgaagtgtttaggcagatctgagcagcatgaccggatgctggaccttacg
gtggagatcgacggagacatatacacacttgagcaggctcttgcacagttcacgtcgtcc
gaaacacttggtggagatgataagtataagtgcaacagatgcaagtcttatgagaaagca
aagaagaaactgaccgtgcttgaggctcctaacgttctcactgtcgttctgaagcgattc
cggtcaggcaattttgagaagctgagtaaactaattcggtttcctgaggttctgaacctt
ttgccttatatgagtgggatgggggacaaatatccaatttatcatctatatgccgtggtg
gttcacttgggtgtaatgaacggtgtttacagcggtcactatgtcagttatgtcaaaaat
ttccaaggacattggtttagaattgatgacagcagggtgagccgtgtggacttggagacg
gtcttatctgaagaagcatacattctcttctatgcaaggcattctccgcggggtgcatct
ttcgtaaggaatagcaatatgtattcggatgggaaaaccaagaaaaacatggaagccatt
ccctccagcaacaattcaaagaagaaaactctgaagacaaaattaagctcttctgctcga
agtgctgcccattggatgtctccaaatgatttcagtggttcccccatgggagatcccgag
gattgggaatttcaagtgcagcagcacaaaaatcacatagttgactcttcgagtgacagt
tcttccattttcagcacatctgatgctggctcgtatagtacagacagcactaaggactca
agtgcagaggacctctccggctacctattcgggtccaactggtaccacccatga
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