Salvia miltiorrhiza (redroot sage): 131001547
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Entry
131001547 CDS
T09291
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131001547
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131001547
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
131001547
NCBI-ProteinID:
XP_057783985
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Position
8:complement(17700445..17704970)
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AA seq
677 aa
AA seq
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MARQKKCGWNLRWLAILLQTFLLAQCAASRWQKIHQNEEDDEIYYPPVQLHDFEDHIVLD
NGILNVTLSTPEGMITKITYNGIHNLLEQEYNENNRGYWDLVWSSPDHPTDIFDKLDGTN
LFVIREDEDQVEVSFVRTWDSSQTGLLPLNIDKRFIMLRGCPGFYSYAIFERLQGWPDLH
MSQGRIVFKLQQNLFEYMAISDDRQRVMPTSEDRNRSQVLDYPEAVLLTNPTNAFLRGEV
DDKYQYSSDNKDSQVHGWIAADPPTGFWIITPSNEFKTAGPLKQDLTSHAGPIALSMFFS
THYAGVPLVLDFRGGEPWKKVFGPVFVYLNSVSPGEDPLALWPDAKEQMMMETKQWPYDF
PMSEDFPPAKQRGRVSGRLLVRDRYMSERLMTASSAYIGVARPGDPGSWQRENKGYQFWS
QCDALGYFRINNIRAGNYSLYAWLPGIIGDYKYNIQINIKPGSKIRLRNVVYDPPRDGPT
LWEIGIPDRSAAEFYVPDPNPTLLNQLYTVQPDKFRQYGLWDRYTDLYPDQDLVYSVESS
IYQTDWYFAHVNRNIGNKTYVPTTWRILFNLTDVDTSANYTLRLALASANDAELQVRING
EEGEAPCFTTGLIGKDNAIARHGIHGLYWLYSVCIGGSVLQSSTNIILLTQSRGSSPWKG
IMYDYIRLEGPSSNTQT
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcagaaaaaatgtggttggaatttgaggtggttggccattcttcttcaaacc
ttcttgcttgcacaatgtgctgcatcaagatggcaaaagattcaccaaaatgaggaggac
gacgaaatatactaccctccagttcagttgcatgatttcgaagaccacatagtgttggac
aatggcatcctcaatgtgactctgtcgacccccgagggcatgatcactaaaataacctat
aacggtatccacaatctactcgaacaagagtacaatgaaaacaacagagggtattgggat
cttgtttggagctcaccggaccaccctacagacatttttgacaagcttgatggaacaaat
ctttttgttatacgagaagacgaagatcaagtggaggtctcattcgttaggacatgggat
tcttcacaaacagggcttcttccactcaatattgacaaaaggtttataatgttgcgcggt
tgccccggattctactcgtatgcaatattcgagcgcctccaaggctggcccgatcttcac
atgtctcaggggaggatagtgtttaagctccaacaaaatctgtttgaatacatggcaata
tccgatgacagacagagggttatgccaacaagcgaagaccgcaacagaagccaggtttta
gactacccggaagcagttcttctaaccaatccaaccaatgctttcctgagaggcgaggta
gatgacaagtatcagtactcgagtgacaacaaggacagccaggtccacggctggatagcc
gcggaccctccaacggggttctggatcatcaccccgagcaacgagttcaagacagccgga
cccttgaagcaggacctcacttcgcatgctggtcctatcgcgctctctatgttcttcagc
actcattatgctggtgtgccgttggtactggacttccgcggtggtgagccatggaagaag
gtgttcggccccgtgtttgtctacttgaactcggtctcacctggggaagatccacttgca
ttgtggcctgatgccaaagagcagatgatgatggaaacgaaacagtggccgtatgatttc
ccaatgtcagaggacttccctcctgctaagcagcgaggcagagtgagtggccgcttacta
gtccgcgacagatatatgagcgaacgccttatgactgctagctccgcatacattggagta
gctcgtcccggtgatcctggatcgtggcagagagaaaacaaggggtatcagttctggagc
cagtgtgatgctctgggatacttcagaatcaataacattagagcagggaactatagcctt
tatgcttggctgcctggaatcatcggagactacaaatacaacatccagattaacatcaaa
ccaggaagcaagattaggcttaggaatgttgtctatgatcctccaagggacgggcctaca
ctgtgggaaatcgggatccctgaccgctctgctgctgaattctacgtgcctgatccaaac
ccgactctcctgaaccagctctacactgtccagcccgacaaatttaggcagtatggtttg
tgggatcgttacacggatctgtacccagatcaagacttggtttattcagttgaatcaagc
atttatcagacagattggtactttgctcatgtgaatagaaacataggaaacaaaacttac
gtcccaacaacttggagaattctgttcaacctcacagatgtggacacctctgcaaactac
accctacggcttgcactggcctcggccaatgatgctgagctgcaggtgaggatcaacggc
gaagaaggagaagctccatgctttacgacagggctaattgggaaggacaacgcgattgct
agacatggaatccacggattatactggctgtatagtgtgtgtataggaggttctgtgctt
caatctagcacaaacattatattgttgactcaatcgagaggatctagcccttggaaaggg
atcatgtatgattatattcgtctcgagggcccatcttctaatactcagacatga
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