Salvia miltiorrhiza (redroot sage): 131001554
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Entry
131001554 CDS
T09291
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131001554
Enzymes [BR:
smil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
131001554
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
131001554
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
131001554
NCBI-ProteinID:
XP_057783995
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Position
8:complement(18268790..18275492)
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AA seq
610 aa
AA seq
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MKIVTYNVNGLRPRISQFGSLRKLLDSFDADIICFQETKLSRQEFRADLVQAEGYESFIS
CTRTTEKGRTGYSGVATFCRVNSVFSSDEVSLPVSAEEGFTGVLKDFSGSGYRNIEYSPL
TAEDVSADELLKIDGEGRCIITDHEHFVLFNIYGPRAVADDTQRIQFKHDFYNILQKRWE
SLLDQGRRIFVVGDLNIAPYAIDRCDAGPDFEKNEFRTWFRSLLVENGGGFFDVFREKHP
QRREAYTCWSTNSGAEEFNFGSRIDHILGAGPCLHKEENQEHSLITCHVKECDILEQFKR
WKPGSTPRHKEQKTRNGKMEGSDHAPVYMSLVDIPNIQKHNTPSLSTRYCPQVYGCQQTL
VSMFARRQSAEDSNLSGGSSSISDDNDVFEKCSQLNKRPLHSCSSASSDFIHQGVLCTSG
VCYKESFKEPSSGSQTSSTIGHTKSSVVCKKKARKSQSSQAQLSLKSFFQKTVGGCSDSS
SFSSDKELTQEDISIGEPNETFTEGSEHDDVKELQAKQCALVHEDMSQPAEKKKNNAALV
EWQRIQQLMQTSIPLCKGHKEPCVSRIVKKPGPTLGQRFYACARAEGPASNPEANCGFFK
WATAKSKNKR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgacgtacaacgtaaacgggctgagacctcgaatctcacagttcggctct
cttcgcaaattgctcgattcctttgacgccgacatcatctgcttccaggaaacaaagctc
tcgaggcaagagtttagagctgatttggtgcaggctgagggttacgagtcctttatctct
tgcactcgcactactgagaaaggccgaactggatattctggtgtggcgacattttgccgt
gtcaactctgtgttttcgagtgatgaggtatctttgccagtttctgccgaggagggcttt
actggtgttcttaaggatttctcaggttcagggtacaggaatattgaatattcaccacta
acggcagaagatgtttctgctgatgagcttctgaaaattgatggtgaaggacgttgtata
ataactgaccatgaacattttgttcttttcaatatatatggccctagagctgtagctgat
gatacgcaaagaatccaattcaagcatgatttttacaacatactgcagaaaaggtgggaa
tctcttctagatcaagggcggagaatatttgttgttggggacctcaacattgccccctat
gcgatagatcgttgtgatgctgggccagatttcgagaaaaacgagtttagaacttggttt
agatctttgctggtggaaaatggaggtggcttttttgatgttttccgggaaaaacatcct
cagagaagagaagcctacacctgctggtcgacaaatagtggtgcagaggagttcaacttt
gggtcacgtattgaccacattcttggtgctgggccgtgcttacataaagaagaaaatcaa
gaacatagcctcatcacttgccatgttaaagagtgcgacatattagagcagtttaaacgt
tggaaacctggtagtacacccaggcataaagaacaaaagacgagaaatggaaaaatggag
ggctcggatcatgctcctgtctacatgagcttggtagatatccccaatattcagaaacac
aatactccttcactgtctactagatattgtccccaggtctatggatgtcagcagacacta
gtgtcgatgtttgcgagaaggcaatctgcagaagatagtaacttatctggaggatccagt
tccatttcagatgataatgacgtcttcgagaagtgcagtcaactcaataaaagacctctc
cattcatgtagctcagcttcatcagacttcatccatcaaggcgtactttgtacatcaggt
gtctgttacaaagaatcatttaaagaaccatcttctggctcacagacttcctctacaatt
ggtcatactaaatcctcagtggtttgcaagaaaaaagcaagaaaaagtcaatcgtctcag
gctcagctttcactgaagtcatttttccagaaaacagtaggtggttgtagtgactcaagc
agcttttcttctgataaggagcttactcaagaagatatctccattggtgaaccaaatgaa
acattcactgaaggtagtgaacatgatgatgtgaaggaattgcaggcaaaacaatgtgca
ttagtgcatgaggatatgtctcaacctgctgaaaagaagaagaataatgcagccctagtt
gaatggcaaaggattcaacagcttatgcaaactagcatacctctttgcaagggccacaag
gaaccttgtgtctcccgcatagtgaagaaaccaggacctactttagggcaacgattttat
gcatgtgcacgtgcagagggaccggcatctaatccagaagcaaactgtggattctttaaa
tgggctactgcaaagtcaaagaacaaaagatga
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