Salvia miltiorrhiza (redroot sage): 131001588
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Entry
131001588 CDS
T09291
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131001588
04131 Membrane trafficking [BR:
smil04131
]
131001588
04121 Ubiquitin system [BR:
smil04121
]
131001588
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131001588
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
131001588
Membrane trafficking [BR:
smil04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
131001588
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131001588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
131001588
NCBI-ProteinID:
XP_057784065
LinkDB
All DBs
Position
8:17730508..17734003
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AA seq
453 aa
AA seq
DB search
MLQIRLSKPASETGATAKPVPVETVTVACPDHLVLADLPVAKGLGTASATAVIKSVGRRS
RRQLGERVHFCVRCDFPVAIYGRLSPCEHAFCLDCARSHSLCYLCDERIQKIQTIKMMEG
IFICAAPHCLKSFLKKSEFELHINEVHADLLHPNKEKEGNESEAMSARKPSASDTTVQAP
LRPVFSPHSSSQVHDREDKAQLPQSREQPPTRPAVQTRPTPPFPGQTPDHPPEHPDSIPS
HPFDRATSQNHFPQQTFEVHGQGGGRQDSVNPNSVPAPPQYGYPPYAADGMQQYFGAPYG
MARPDSTPEGGPGQGSLLGFPPGPAGPMNFPQNYPQWNAVPGSVPLEPPMVSQGSSDGFM
NVDPQGRGFFQNDYGQNAGNKSLEQQRQSGNFVDPRDGKGILAAQPLHLPPPPPIPPPHL
QRGRSYSGDGNHDGPPGFSWPAERRDGFGGVQD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagattcggcttagcaagccagctagtgaaactggtgcaactgcaaaacctgtg
cctgtggagaccgtcacagttgcttgccccgatcatcttgtgttagctgatcttcctgtg
gcgaagggtctgggtacagcatctgcaactgctgttatcaagtctgttggacgacgctcc
cgtcgccagcttggcgagcgtgttcatttctgtgttcgatgcgactttcccgtcgctatt
tatgggcgtctgagcccatgtgagcatgccttctgtttggactgtgccaggagccattct
ctttgttatctctgtgatgaacgcattcagaagatccagacgattaaaatgatggaagga
atctttatatgtgcagcccctcattgtctcaagtccttcttaaagaagagtgaatttgag
ttgcatattaatgaggtccatgctgaccttcttcacccaaataaggaaaaagaagggaat
gaatcagaagcgatgagtgctaggaaaccttcagcctctgataccacagttcaagcaccc
ctgcggccggttttttctccacattcaagttctcaagttcatgatcgtgaagacaaagcc
cagttgcctcaatccagggaacaaccaccgacgagacctgctgtacagactaggccaacg
ccaccttttcccggacaaactccagatcatccaccagagcaccctgatagtattccatca
catccctttgatagagctacttctcagaaccactttcctcagcaaacttttgaagtccat
gggcagggtggtggtcgacaagattcagttaacccgaattcagttccagctccacctcaa
tatggttatcctccttatgcagctgatggaatgcaacagtactttggtgcaccatatgga
atggcaagaccagattctacaccagaaggtggaccgggacagggctcattgctaggtttc
cccccgggtcctgccggacccatgaattttccacaaaattatccacagtggaatgcagtg
cccggttctgtgcctttggaacctcctatggtatctcaagggtcttcggatggcttcatg
aatgtcgatcctcaaggaaggggattctttcagaacgattatggacagaatgctgggaat
aagagtttggaacaacagaggcagagtgggaattttgtggacccaagggatggtaaagga
atattggcggcccaaccgctccatcttcctccaccacctccgatacctcctcctcacctg
caacggggcaggtcgtactctggtgatgggaatcatgatggaccaccggggttcagctgg
ccggctgagaggcgagatggcttcggaggtgtccaggactag
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