Salvia miltiorrhiza (redroot sage): 131001602
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Entry
131001602 CDS
T09291
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131001602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
131001602
Spliceosome [BR:
smil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131001602
Complex C
U4/U6.U5 tri-SnRNP related factors
131001602
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Bee_toxin
Motif
Other DBs
NCBI-GeneID:
131001602
NCBI-ProteinID:
XP_057784095
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Position
8:complement(18678957..18683003)
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AA seq
409 aa
AA seq
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MSEIKSSGRPFDQLLEKVLCMNILSSDYFRDLLKLKTYHEVIDEIYVTVTHVEPWMTGNC
RGPSTAFCLLYKFFLMKLTVKQMHGLLTHPDSPYIRAIGFLYLRYVADPKTLWGWCEPYV
KDDEEFSPGCNGRMTTMGAYVRDLLLGQYYFDTLLPRIPVLVLRTVVANLENMNLPSKHC
GVTGETTRGSEETARRPPSVKAALSVSFGQRAPHRTLTRDSSPVRRTVNHSYDRGNESRR
SPNHPGSQSGDLSDRDYPGRERDRGKDSNSDRYRDRDDERRREMEKGKDRRYDYDRRSRD
NYRRNYDRRGRDDYRREGSARQSRSRSRSRSRSQSQNTHEYGRHNVSSHNPFSHESKEKR
LASNNLAELKDLYGVSSNQKEGVAETSEGRPYRPSGTEEVIRLGGSSWR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagataaagtcatctgggagaccatttgatcaattattggagaaagtgttgtgc
atgaatatactttcttctgattattttcgagacctgttgaaattgaaaacttatcatgaa
gttattgatgagatttatgttactgtcacgcacgtggagccatggatgactggcaactgc
cgagggccttctaccgcattctgccttctctacaaattctttcttatgaagctcactgtc
aaacaaatgcatggattattgactcacccagattctccttatattagagcaataggattt
ctctatttaagatatgtagcagatccgaagactttatggggttggtgtgaaccatatgta
aaagatgatgaggaattctctccgggttgtaatggccgtatgacgacaatgggtgcgtac
gtgagggacttgcttcttggacagtactactttgacacacttcttcctcgtattcctgtc
ctggtgttgcgcactgttgtagccaatcttgaaaatatgaacttgccgtctaaacactgt
ggagtgactggtgagaccactcgtggaagtgaagagactgcaagaagaccaccttctgtc
aaagctgctctttctgtctcttttggtcaacgtgcgcctcatcggacattaactagggat
tcatccccagttcggcgtacagtcaatcattcttatgatcgaggtaatgaatcaagacga
tctcccaatcatcctgggagccaaagtggtgatctatctgatcgggattatcctggaagg
gagagagacaggggcaaggacagcaacagtgatcgatatagagacagggatgatgaaagg
agaagggagatggaaaaaggtaaagataggaggtatgattatgacagaaggtctcgagac
aactatagaaggaattatgataggaggggccgtgatgactacagaagagaaggtagtgct
cgtcagagccgaagtaggagcaggagcaggagccggagtcaaagtcagaacacccatgaa
tatggtaggcataatgtaagtagtcacaatccatttagccatgaaagtaaggaaaagaga
ttggcatcaaataatctagctgagctcaaagatctatatggtgtatcgagcaatcaaaag
gagggcgtggctgagacctcggagggtcgcccttacaggcctagtggtactgaggaggtg
atcagactaggtggttcttcgtggaggtaa
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