Salvia miltiorrhiza (redroot sage): 131001822
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Entry
131001822 CDS
T09291
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smil03009
]
131001822
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131001822
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
Pre-60S particles
Helicases
131001822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
131001822
NCBI-ProteinID:
XP_057784403
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All DBs
Position
8:complement(21438799..21450256)
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AA seq
606 aa
AA seq
DB search
MAKRKRNPQNDSVNEKKEQEKAVVAGEVEEEQDDDERSFEELGLDARLVRALSKKSIEKP
SPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFADSPSKLNLAPAVIILVPTR
ELCQQVYSEVTSLIESCRVQLKVVQLRSTMSDSDLKTSLAGLPDIVVSTPACVQTCLKNG
ILQAKALQESLSVLVLDEADLLLSYGYEDDIKALTAYVPKRCQCLLMSATSSADVEKLKK
LILHNPYILTLPEVGDVKDDIIPRNVQQFYISCSARDKLVHILALLKLELIQKKVLIFVN
SIDTSFRLKLFFEQFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLVATDDSQSAEEQND
KENHASKKKSKKHSKKKLDAEFGVVRGIDFKNVYTVVNYDMPQTAAGYVHRIGRTGRAYN
TGASVSLVCPEEMEIFDEIKSILGENDTEDSKYIAPFPLLSKNAVDSLRYRAEDVARSIT
KIAVRESRAQDLRNEILNSQKLKAHFQDNPNDLDLLKHDKVLSKKEPAVHLRDVPEYLLD
ATTKEASKIVKLARAAMGNTGSTRRKGFKGKFKKSRDPLKTFSAEAPKRGHKGGTKRKGK
NQDDGH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagaaaacgcaatccccaaaacgacagcgtaaatgagaagaaggaacaagaa
aaagcggttgttgcaggagaagtagaagaagaacaggatgacgacgagcggagcttcgaa
gaattgggcctcgacgcccgcctagttcgtgccttatcgaagaaatcaatcgagaagccc
tctccaatccagcgcgttgctatccctctcattctcgaaggcaaagatgtggtggctcga
gcgaaaaccggctccggtaaaacattagcttatctgctcccgctgcttcagaaactgttt
gctgattcgccgtcaaaattgaatcttgctcccgccgtgattattcttgttccaactcga
gagctgtgccaacaggtttattcggaagtgacgtcactgattgagtcatgcagagtgcaa
ctaaaagtagttcagctgcggagcacgatgtctgattctgacttgaaaacgtctttggct
gggcttcctgatattgttgtatcaacacctgcttgtgtacaaacatgcttgaaaaatggt
attcttcaagctaaagctcttcaagaatcactttcagttcttgtccttgatgaggcagat
cttctgttgtcatatggatatgaggacgatataaaagcacttacagcttatgttccaaag
cgctgccagtgccttctcatgtctgctacttcaagtgctgatgttgaaaagctgaaaaag
cttattctacataatccatacattctaacactaccagaggtgggagatgtaaaggatgat
atcattcccagaaatgttcagcaattttatatttcatgtagtgctcgtgacaagcttgtc
catatccttgctctcttaaaactggagctgattcaaaagaaagtgctgatttttgttaat
tctattgacacgagttttagactgaagcttttcttcgaacagtttggaattaaatctgca
gttttaaatgctgagctgcctcagaactctcgtctacatattcttgaggagttcaatgcc
ggtctgtttgattaccttgttgctactgacgacagtcaatcagcagaagagcagaatgat
aaggaaaatcatgcttctaaaaaaaaatctaaaaaacactccaagaagaagttggatgca
gaattcggtgtagtaagaggaatagacttcaaaaatgtgtacacggtggtgaactatgac
atgcctcaaactgcagctggatatgtgcatcggattggacgtactggaagagcatataat
actggtgcatctgtctctttagtttgtcctgaggagatggaaatttttgatgagattaaa
tctattttgggtgaaaatgatacggaggactcaaaatatattgctccattcccgttgctt
agtaaaaatgctgtggactccttacgctacagagccgaggatgttgcgaggagtataaca
aaaattgcagtgagagaatcacgcgcacaggatctaagaaatgaaattcttaattctcag
aagttgaaggctcattttcaagataacccaaacgacttagatctgttgaaacatgacaaa
gttctgagcaaaaaggaacctgcagtgcaccttcgtgatgtgcctgagtacttactggac
gcaacaacaaaagaagctagcaagattgtaaagcttgctagagctgccatgggaaatact
ggttcgactcgtcgcaaagggttcaaaggaaaattcaaaaaaagcagagatcccttgaaa
acattctctgctgaggcaccaaagcggggacataaaggtggaacgaagaggaaaggtaaa
aaccaggatgacggacactaa
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