Salvia miltiorrhiza (redroot sage): 131001922
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Entry
131001922 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 20-like
KO
K10779
transcriptional regulator ATRX
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smil03000
]
131001922
03036 Chromosome and associated proteins [BR:
smil03036
]
131001922
Transcription factors [BR:
smil03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
131001922
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131001922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
131001922
NCBI-ProteinID:
XP_057784554
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Position
8:complement(22819350..22827427)
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AA seq
1256 aa
AA seq
DB search
MENGNSDDDYLENESIAQYYEDEEESFSQEPLSEEELENLVAELVEIERKSAEAQEALEE
EPLMEVEADAREELAQSLSGDELEKAVLEEMSIYKEEWELMLDELEKESAYLLEQLDGSG
IDLSSLYKWIEKQVPNICHTEAWKGRTHWVGTQISDEATKSVLQAEEYLKIHRPVRRWHG
ASGFLGKKIAKCDKSVAVDKSMDKDWEAFGKLCSETASNKDNEPGATHWASVYLASTPLQ
AAALGLKSAGVDEVEEIDDVDAASSDPFVADAISNERDLCLTEEQKRNLRKIKEEDDAKD
DLKLHNHLKEMRRRRQNREGELSSIDEESHMDVVIIDDNGSTEDVTKHLYDLSADPDREK
AKRNYDTYASNSVVIFSSSESDSDKEANVNERRNVKKSEVVTISSSDSDSEADGNVDSST
KSRRKKIRRILDDAELGEETQKKIAIEKERQERLRSLEVTESVMVGKGVGVEVPDNASSG
YIINLVREEDEEAVRIPPSISMKLKPHQISGIRFMWENIIQSARKVRSGDKGLGCILAHT
MGLGKTFQVIAFLYTAMRCADLGLKTALILTPVSVLHNWHHEFSKWRPSELKPLGIFMLK
DARRKKRLELLTKWRTKGGIFLIGYAAFRNLTLGKYVKDTNEAREISHALQVGPDILVCD
EAHIIKNTMSDTTQALKLVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGCCTEFRNR
FQNPIENGQHSDATSEDVKIMNQRSHILYEQLKGFVHRMGASTVKNDLPSKTVFVIAVKL
STLQRRMYRGFLDYHGFAKGKATGDKKSFFAGYQALAQILNHPSILKLMKENKDQSKFED
VEKSVADEGPGDENIECNVISEEKLQNPQKKLSNAYVDEDWWSGLLPENTFKEVDYSGKM
VLLLDILTMCSDMGDKALVFSQSLSTLELIEYYLPSLPRPGENGKCWEKGKDWYRLDGRM
ESSERQKLVDRFNEAANKRVRCVLISTRAGSLGINLCAANRVIIVDGSWNPTYDLQAIYR
VWRYGQTKPVFAYRLMAHATIEEKIYKRQVNKEGLAARVVDRQQVHRTISKEEMVDLFDF
VDDESALVLHDSGQEHVVDKPDTSGSIGDMLKQCRPPSLGASSDEVMQILINRHQPRWIL
SHHEHEALLQENEDEKLSKEEQDSAWDVYKKTLKLDVSADDQHKIIVDPSSQQSSTVVSK
AGVSCVSTSVNDAATRRGKCTELSHLLTLRSQGTKAGCSTICDECGEGVSWEVLGL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggtaattccgacgatgattatctggaaaatgaaagtattgctcaatattac
gaagatgaggaggaatcattttcccaggaacctttgtctgaagaggagttggaaaatctc
gtagccgagcttgtagaaattgagagaaaatccgccgaagcgcaagaggctttggaagag
gaacctctgatggaagtagaagccgatgctagggaagaattagctcagtctctctcgggt
gatgaattggagaaggctgttttggaagagatgtcgatatacaaggaagagtgggagttg
atgcttgatgagctcgagaaggagagtgcttatttattggaacaactcgatggttctgga
atcgatctttccagtttgtataagtggatcgagaagcaagttcctaatatctgtcacaca
gaagcatggaaagggaggactcactgggtcgggactcagatatcagatgaagctacgaaa
tcagtcttgcaggcggaagagtatctcaagattcacaggcctgtgagaagatggcatggt
gccagcggtttcctcgggaagaaaattgcaaagtgtgataaaagtgtagctgtagacaaa
agcatggataaagattgggaagctttcggcaaattgtgctcagaaacggcatctaataaa
gataacgaacctggtgctacgcactgggcttctgtttacctggccagcactccactgcag
gctgctgcattgggtctaaaatctgctggagttgatgaggtggaagagattgatgatgtc
gatgctgcttcaagcgatccatttgttgcagatgctatatcaaatgaaagggatctttgt
cttactgaagagcaaaagagaaaccttagaaaaattaaagaggaagatgatgcaaaggat
gatctcaagcttcataatcacctgaaagaaatgagacgtagaaggcaaaacagagaggga
gaactttcatcaatagatgaggagagccacatggatgtcgtcatcattgatgacaatggg
tctactgaggatgttaccaaacacctgtacgatttgtctgctgaccctgatagagagaaa
gctaagaggaactatgacacttatgcttctaattctgtagtcatattctctagttccgaa
tctgattcagataaggaagccaatgtcaacgagaggcggaatgtgaaaaaatctgaagtt
gttaccatctcgagttctgattctgattcagaagctgatggcaatgtcgactccagcact
aagagtagacgaaagaaaattcgtagaatccttgatgatgctgaacttggagaggagaca
cagaagaaaattgcaattgaaaaggaacgtcaagagcgccttcgatctttggaggtcaca
gaatctgttatggtcggcaaaggagttggagttgaagtcccggacaatgcatcctcgggt
tacataataaacttggtgagagaggaagacgaagaggcagtgaggattcctccgagcatc
tctatgaaactaaaaccccatcagatttcagggatccgattcatgtgggaaaatattatt
caatcagcgagaaaagtcagatccggggacaaaggtcttggttgcattttggcacataca
atggggttaggaaaaacgttccaggtcattgcttttctatacactgctatgagatgcgcg
gacctagggctaaaaacggcacttatcttgacgcctgtaagcgttctacataattggcat
catgagttttcaaagtggagaccatcggagctaaaaccacttgggatcttcatgcttaaa
gatgctcgaaggaagaaaaggctcgagttgctgacgaagtggagaaccaaaggtggcata
ttcttgatcggctatgctgcattccgtaatttaaccctcgggaagtatgtcaaggatacc
aacgaggcgagggaaattagccacgcgcttcaggttggacccgacatccttgtgtgtgac
gaggctcacattatcaagaacaccatgtctgacacgacgcaggcgctgaagctagtgaaa
tgccagcgaaggattgcactaactggatcacctcttcaaaacaatttgatggagtactat
tgcatggttgattttgttcgagaaggctttcttggctgctgcaccgagtttaggaaccgt
ttccaaaatcccatcgaaaacggccagcatagtgatgctacctctgaagatgttaagata
atgaaccaaagatctcatattctatatgaacagttgaagggatttgttcaccggatggga
gccagcacggtcaaaaatgacttaccctccaaaactgtttttgtcattgctgttaagtta
tctactctgcagaggagaatgtatagaggcttcctcgactatcatgggttcgcaaagggc
aaggcgactggtgacaaaaaatctttctttgcaggttaccaggccttagctcagatattg
aaccatcccagcattctgaaattgatgaaagaaaacaaagaccaaagcaaatttgaagac
gtagaaaaatctgttgcagatgaaggaccgggtgatgagaatatcgaatgcaatgtgata
tctgaagaaaagctgcagaatcctcaaaaaaaacttagcaatgcttatgttgacgaagac
tggtggagtggtcttttaccggaaaacactttcaaagaggtggattacagtggaaaaatg
gttttgctacttgatattctcacaatgtgttcggatatgggcgataaggccctcgtcttt
agccaaagtttgtcgactttggagctgattgaatattatctaccaagcttgcctcgacca
ggagagaacggaaaatgttgggaaaagggcaaggactggtacagattagacggaagaatg
gaaagctcggagaggcagaagttggtggatagattcaatgaagctgcaaataaaagggtc
aggtgcgttttgatttctacgagggctggatctctggggatcaatctttgtgcagctaat
cgagtcatcatagttgatggctcttggaacccgacatatgatcttcaagctatttaccgg
gtttggaggtatggccagacgaagccggtctttgcataccgactgatggcacatgccaca
atcgaggagaaaatctacaagcgtcaggtgaacaaggaaggccttgcagcgcgagtagtt
gataggcagcaggtgcacaggacgatttctaaagaagaaatggtggatttgtttgatttt
gtagatgatgaaagtgctcttgtactgcatgattcgggacaagagcatgtcgtggacaaa
ccggacacgtcaggtagcattggagatatgttgaagcagtgccggccaccttctcttgga
gcttcttcggacgaagtgatgcaaatcttgatcaacagacatcagcccagatggattttg
agccatcacgaacacgaggcgctcttgcaagagaatgaagacgagaaactgtcgaaagag
gagcaggactcggcgtgggatgtgtacaagaagacgctcaagctggatgtttctgcagac
gatcagcataagatcattgtcgatccatcctcacagcaaagttcaacggtcgtgtcgaag
gcaggggtttcttgtgtctcgacatccgtgaatgatgcagcaacacgccgtgggaagtgc
acggagctgtcgcatctactaacattgaggagtcaaggcacaaaggcaggttgcagcacc
atctgtgatgaatgtggcgaaggagtaagttgggaggttttggggttataa
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