Salvia miltiorrhiza (redroot sage): 131001967
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Entry
131001967 CDS
T09291
Name
(RefSeq) cell division control protein 48 homolog C-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131001967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smil03009
]
131001967
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
131001967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_5
RNA_helicase
Rad17
AAA_2
TIP49
AAA_28
ATPase_2
TsaE
ABC_tran
DUF815
NACHT
ORC-CDC6-like
IstB_IS21
AAA_18
AAA_7
AAA_21
Motif
Other DBs
NCBI-GeneID:
131001967
NCBI-ProteinID:
XP_057784609
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Position
8:complement(23287348..23294917)
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AA seq
779 aa
AA seq
DB search
MPSSHRETCFSGKKSSMAGERGSAVGPLYPREEQVLRSHIESAVAGRKQFTASATGGAPL
LQLPGSITPLSCRRDDAMDEPTRKRQKIDETRNASRQIEVFRAYASASYSDSNGREVDPS
KRDESGGDGRKMRDGARRDANGVNGAIVGDLEGVNELGDGKTEMNKNGEGERRDVNIWPL
FSDFGGLHMMIDKFREVILPLHQWKLLRHFGAEPMTAVLLHGPRGCGKTALARAFGNEAG
VPFFETSAAALMSGVTGTLELFCRAYRKAPSIVFIDEIDALTSEMGSLRPCPVKQLMACM
DEPVNDGSDSESSNSGPGYVLMIGATNKPDAIDPALRRRFDREFRIRVPEKYDRRDILSV
LTRNLKLEVGFDLSKLAEWTLGFVAGDLVALVKEARKVAVKRAIYNRVFKDKRELGFDVS
FRECSRKPFSDEELENLSIAMHHFVEAGMLVHPSAKMEGFSTTPYAKWGDVGGLQFLKLE
FERGVVKPIKFPLVYQDLRVYYCDTFFLYGPSGCGKTLIVKALAREAGANFMHIKARELL
KFGDQSDTVVQNIFSYANSHPPCIVFFDELDVMTSCGDEDKDKDKDEEEDKDKDKDKDKD
NGEGKGEDKGEDDDDDEDGNNWGDWPWPDFRQLVSETGSLSTKKGVYVIGASSRPEIMSH
ILSIRDYFGAIRYVPLPTPKERGAILKALARGKPIDADVDLMALGKDVACGNFSGDDLSA
LMREASHFAIDRPSLSSGGCMTIKDADFKRALAKVSPSLSSTEVKNWELHAKKMESMPW
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgccctccagtcaccgggaaacttgtttttccggcaaaaaatcgagcatggctggagaa
agaggcagcgccgttgggcctctctatccgcgtgaagaacaagttctgcgcagccacatc
gagtccgccgtcgccggccgaaaacagttcaccgcaagtgcaactggtggagctcctctg
ctccaacttcccggaagcattactccgctttcgtgcaggagagacgatgccatggacgag
ccaactaggaagcggcaaaaaatagacgagactcggaatgcgagtaggcaaattgaggta
tttagggcatacgcttctgctagttattcggattccaacggtagggaagtcgatccttct
aagagggatgaatctggtggtgatgggagaaagatgcgcgacggtgcgaggagggatgcg
aatggggttaatggggcaattgttggggatttagagggagttaatgaattaggcgatggt
aagacagagatgaacaagaatggcgaaggtgagaggagggatgtgaatatctggccactg
tttagtgattttggtgggttgcatatgatgattgataaatttcgggaggtgattttgcca
ctgcatcagtggaagttactacgccactttggagctgaacctatgaccgcagttctgttg
cacgggcctcgggggtgtgggaaaaccgcattggcccgagcctttggcaatgaggctgga
gtgccgttctttgaaacatctgctgctgcactgatgtctggagttacaggtaccctagaa
ttgttctgcagagcataccggaaagcaccatctattgtgttcattgatgaaattgatgca
ttgacttcagaaatgggaagtttgcgtccgtgcccagtaaaacagttgatggcttgcatg
gatgaacctgtaaatgacggttctgattctgaaagttctaatagtggacctggctatgtg
ctgatgattggagcaaccaataaacctgatgctattgaccccgccttaaggcggaggttt
gatcgtgaatttcgtatacgtgttccagagaaatatgatcggcgtgacatattatctgtt
ctaacacgtaatcttaagcttgaagttggttttgatctttcaaagttagctgagtggact
ctgggttttgtagcaggagacttggtagcactagtaaaagaggctcgtaaggttgctgtg
aaaagagccatttacaatagagtatttaaggataagagagaactgggatttgacgtttcg
tttagagaatgttccagaaaaccattttcagatgaagaactggagaacctcagcatagcc
atgcatcattttgtggaagctggtatgttggttcacccttctgctaaaatggaaggtttc
tccaccacaccatatgcaaagtggggtgatgttggaggccttcaatttttgaaattggag
tttgaacgtggtgtagttaagcctataaagtttcctctagtttatcaggatcttcgggtg
tactattgtgacacctttttcctttatggtccttctggctgtggaaagacattgattgtc
aaggctttggctagagaagcaggagccaatttcatgcatatcaaggcccgtgaactactg
aagtttggcgatcagagtgatacggtggtgcaaaatattttcagttatgcaaattctcac
cctccatgtatagttttctttgatgagttggacgtaatgacctcatgtggcgatgaagac
aaagacaaagacaaagatgaagaggaagacaaggacaaggacaaggacaaggacaaggac
aacggcgaaggcaaaggtgaagacaaaggcgaagacgatgacgatgacgaagacggaaac
aattggggcgattggccatggccggactttagacagctagtatcagagaccggtagttta
tcgactaagaaaggtgtttacgtgattggtgcatcaagtaggccagagatcatgagtcat
atcctttccatcagagattattttggtgcaattcggtatgttcctcttcctactccaaaa
gaaagaggagcaatattgaaagctcttgctcgaggcaagccaatagatgccgatgtggac
ctgatggccctaggaaaagacgtagcttgtggaaattttagtggtgacgatctatctgct
ttgatgagagaagcttctcattttgccattgatcgaccgtcattgtccagtgggggttgc
atgaccatcaaagatgcagatttcaagagggcgttggcgaaagtctccccgtctctctca
tccacggaagtcaagaactgggagcttcatgcgaagaagatggaatctatgccttggtag
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