KEGG   Salvia miltiorrhiza (redroot sage): 131002846
Entry
131002846         CDS       T09291                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03030  DNA replication
smil03410  Base excision repair
smil03420  Nucleotide excision repair
smil03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131002846
   03410 Base excision repair
    131002846
   03420 Nucleotide excision repair
    131002846
   03430 Mismatch repair
    131002846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smil03032]
    131002846
   03036 Chromosome and associated proteins [BR:smil03036]
    131002846
   03400 DNA repair and recombination proteins [BR:smil03400]
    131002846
DNA replication proteins [BR:smil03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    131002846
  DNA Replication Termination Factors
   ELG1-RFC complex
    131002846
Chromosome and associated proteins [BR:smil03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    131002846
DNA repair and recombination proteins [BR:smil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     131002846
  Check point factors
   HRAD17(Rad24)-RFC complex
    131002846
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 AAA_22 DUF815 Mg_chelatase AAA_5 ABC_tran RuvB_N RsgA_GTPase AAA_23 AAA_16 AAA_24 AAA_29 AAA_2 MyTH4 nSTAND3 T2SSE
Other DBs
NCBI-GeneID: 131002846
NCBI-ProteinID: XP_057785303
LinkDB
Position
Unknown
AA seq 354 aa
MLWVDKYRPKTLDKVLVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG
PGADKVKVENKNWRVDAGSRAIDVELTTVSSTHHVELNPSDAGFQDRYVVQEIIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR
CLNLRINAPTEGEITTVLEFIGKKEALQLPPGFADRIAHQSNRSLRRAILLFETCRVQQY
PFAPNQAIPPMDWEEYVSEIASSIFKEQSPKRLFEVRGKLYELLVNCIPPEIILKRLLHE
LLKKLDSELKHEISHWAAYYEHRLRLGQKAIFHLEAFVAKFMSIYKGFLIETFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtggataaatatcgtcccaaaaccctagacaaggttctggtccacgaagat
attgcccaaaatctcaagaaactggtgactgagcaggattgtccccatctgctattctat
ggaccatccgggtcgggtaagaaaaccctaattatggcccttctcagacaaatatttggt
cctggagctgacaaggttaaagtggaaaacaaaaactggagagttgatgctggttcaaga
gcaattgatgtagagcttactacagtatcaagcacgcatcatgttgaactgaatcctagt
gatgcaggatttcaagatcggtatgtggttcaagagataattaaggaaatggcgaagaac
cgaccaattgacaccaagggaaaaaagggtttcaaagttctcgtgttgaatgaggttgac
aaactctcaagggaagcgcagcactctctacgaagaacaatggagaaatatagtgcatcc
tgtcggctaattctctgctgtaatagctcttctaaggtcactgaagccatccgctctcgt
tgtctgaacttgcgcataaatgcaccaacagaaggagagatcacaacggtgttggaattt
attggcaagaaggaagcattgcaactcccacctggatttgctgatcgaatagctcatcaa
tctaatcgaagcctaaggagggcaatactattatttgagacttgtcgtgtccaacagtat
ccttttgcacccaaccaggcaataccacctatggattgggaggaatatgtttcggaaata
gcatcaagcatatttaaggagcagagtcctaaaaggttgtttgaggtccgtggaaagcta
tacgagttacttgttaattgtatccctccagaaatcattttaaagagattgcttcatgaa
ttgctgaagaaattggactctgagctaaagcatgagatctctcattgggcagcttattat
gaacatagattgcgtcttggacagaaagcaatattccaccttgaagcatttgtagccaag
ttcatgagcatctacaagggtttcctcattgagacattcggctga

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