Salvia miltiorrhiza (redroot sage): 131004071
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Entry
131004071 CDS
T09291
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03030
DNA replication
smil03420
Nucleotide excision repair
smil03430
Mismatch repair
smil03440
Homologous recombination
smil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131004071
03420 Nucleotide excision repair
131004071
03430 Mismatch repair
131004071
03440 Homologous recombination
131004071
03460 Fanconi anemia pathway
131004071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smil03000
]
131004071
03032 DNA replication proteins [BR:
smil03032
]
131004071
03400 DNA repair and recombination proteins [BR:
smil03400
]
131004071
Transcription factors [BR:
smil03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131004071
DNA replication proteins [BR:
smil03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131004071
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131004071
MMR (mismatch excision repair)
131004071
DSBR (double strand breaks repair)
HR (homologous recombination)
131004071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
zf-CCHC
tRNA_anti-codon
zf-CCHC_3
DUF223
zf-CCHC_2
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
131004071
NCBI-ProteinID:
XP_057786647
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MDAVQLTEGAISSLSSPDTDKASLKPVLQVYDVRPVSPQNHNSERYRLMLSDGEFLQQGM
LATQRNEMVKSNMLMKGSIVRLMQFVCNVVQNRRIIIIIDLEVLVRECEIIGQPKTYPFM
ADGTPHVAKPPARTQLINQPANPAESSFSVSSPRPTMGAGPAVAHFQQSGEDYNSGSHSY
SSSFSGNMNSGRYNPSNASAIYPKPEVDSGIPRAHMNNYARPPSSLYQQPSPMFANRGPI
AKNEAPPRIIPIAALNPYQGRWTIKARVTAKSELRLYNNPRGDGKVFSFDLLDSDGGEIR
VTCFNAVADQFYHQIESGKVYMISRGTLKAAQKAFNHLRNDYEIMLDNTSTVQPCYEDDK
SIPQQQFHFRPISDIEGLDNNSILDLIAIVSSINPPSSIMRKNGTETQKRTLQLKDMSGR
SVELTLWGNFCNAEGQTLQTMCDSGQFPVLAVKSCRVNDFNGKSVGTISSSQLFIEPDFP
ELQRLKTWFNSNGKNTPAIPLSREAGTARTDVRKTISQIKDEKLGTSEKPDWITVSATLI
YIKVDNFSYTACPIMIGDRQCNKKVTNNGDGKWRCERCDQSVDECDYRYILQMQIQDHTG
ITWVTAFQESGEEIMGRSAKELYYMKHEEQDEEKFSEVLRDILFTKFMFKLKVKEETFSD
EQRVKSTVVKAEKVNFQTEAKYLLDLAAKSKNEDLGSLPPKSEGMSASGLTTVGFGGSGE
PATAAAMNYSGVTNNVAREGGASMSQSGNQYGGSRYPSTGIYTSCGSCGSSGHSSANCPS
LMTAPGQSYGTGLGSRATLGDNGVGASGGASGECFKCHQTGHWARDCPGVSNAPPAYGTY
NANSVSGAGGGASGECFKCHQTGHWARDCPGVGNAPAYGTNNANTGRYGMAPKQYVGGF
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggttcaattgacggaaggcgcaatatcttctttgtcgagccccgacaccgac
aaggctagcttgaagccggtattgcaggtctacgatgtacgccccgtcagtcctcagaat
cacaactccgagcgataccggctcatgctttccgacggcgagttccttcagcaaggaatg
ctggccacccagcgcaatgaaatggtcaaatcgaatatgctgatgaaaggctccatcgtc
cggttgatgcagttcgtctgcaacgttgtccagaatcgcaggattatcatcatcattgat
ctagaggtgttagttagagaatgtgagattattggtcaacctaagacatatccattcatg
gctgatggcacccctcatgtagccaaaccacctgcacgaactcagctgataaatcagcca
gctaaccctgctgagtcatcatttagcgtttcctctccaaggccaactatgggtgctggc
cctgctgtagcgcactttcaacagtcaggggaagactacaattcaggctcacattcatac
agtagttctttttctggaaatatgaactcaggaagatataatccttcgaacgcgtcggca
atatatcccaaacctgaagttgattcaggcattccacgggctcatatgaacaattatgcc
cgcccacctagttccttgtatcagcagccgtctccaatgtttgcaaatagaggaccaatt
gctaaaaatgaagctcctccaagaataattccaattgcagcactgaatccatatcaaggc
agatggacaatcaaggccagagtgacggcaaagagtgaactcaggctgtacaataatcct
cgaggtgatggaaaagtgttttcatttgatcttcttgattctgatggtggagaaataagg
gtcacttgcttcaatgctgttgcagatcaattttaccatcaaattgagtccggtaaggtt
tatatgatctccagagggacactgaaagctgcacagaaagcttttaatcacctacgcaat
gattatgagataatgctggacaatacatcaactgtgcaaccttgttatgaagatgataag
tccatcccacagcagcaatttcatttccgtcccataagtgatattgaaggcctggacaac
aacagtattttggatctaattgctattgtttcatcaatcaatccacccagctctataatg
aggaaaaatggtactgaaactcagaaaaggactctccaattgaaggacatgtctgggaga
agtgttgagttgactttgtggggaaacttctgcaatgctgaaggacaaacgctgcaaacc
atgtgtgattctggccaatttcctgttttagcagtgaaatcttgtagggttaatgatttc
aatggaaaatctgtgggcaccatatccagtagtcagttgtttatagagcctgattttcct
gagcttcagagacttaaaacttggttcaacagcaatggaaagaacacacctgctatacct
ctatcaagggaagcaggtacagcccgcactgatgtacgcaaaaccatatcccagatcaaa
gatgaaaagttggggacctctgagaaaccagattggatcacagtttctgccactctaatt
tacataaaagttgataatttttcttataccgcatgcccgatcatgattggagatcgacaa
tgcaacaaaaaggttactaataatggggatggaaaatggcgttgcgagagatgtgaccag
tctgttgatgagtgtgattataggtatatcctccagatgcaaatccaggatcacactggc
ataacatgggtgactgcatttcaggagagcggagaggagataatgggtagatcagccaaa
gagctgtactacatgaagcatgaggaacaagatgaggagaaattcagtgaggtgttgcgt
gatatcctttttacaaaatttatgttcaaactgaaagtgaaggaagagactttcagcgac
gaacagcgcgtgaagtcaacagtggtgaaagcagagaaggttaacttccaaacagaagcc
aagtatctactggatttggcggctaaatccaaaaatgaggacttaggttcactacctcct
aaaagtgaaggtatgtcagcatctgggctgactactgttggatttggtggaagtggagaa
cctgcgacagctgctgctatgaattacagtggagttactaataatgtggccagagagggt
ggtgcaagtatgagtcaatctggtaaccagtatggtggctcgagatatccttccactgga
atatatacaagttgtggtagctgtggaagctctgggcatagctctgcgaattgcccaagc
ctcatgactgccccgggacaatcttatggaactggtcttggcagtagggcgacgcttggg
gataatggtgttggggctagtggtggtgcgtctggcgagtgctttaaatgccatcaaacc
gggcactgggcaagggactgcccaggtgttagcaatgctcctcctgcttatggaacctat
aatgccaactccgtatctggggctggtggtggtgcgtctggcgagtgctttaaatgccat
caaaccgggcactgggcaagggactgccccggtgttggcaatgctcctgcttatgggacc
aataatgccaataccgggcgatatggaatggcaccgaagcaatacgtgggcggcttttga
DBGET
integrated database retrieval system
