Salvia miltiorrhiza (redroot sage): 131004116
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Entry
131004116 CDS
T09291
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131004116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131004116
03036 Chromosome and associated proteins [BR:
smil03036
]
131004116
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131004116
Coactivators
SAGA/TFTC/STAGA complex
131004116
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
131004116
STAGA complex
131004116
TFTC complex
131004116
SAGA complex
131004116
SLIK complex
131004116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
131004116
NCBI-ProteinID:
XP_057786704
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MAENSPSSSSPPKPLPVQQSPAMIEPSNSQQLQPLQSPSPSLDHQQQQQQLVQSQQQQLV
QQPQMVQAQQQMVQPQQQQLQQLQQQIMQQQGNTNSVNGGGSGGNNLIGVSNFQGMQRNP
SISRLNQMQQSSSINSQLGMMRQQQQQQQQNSPSIYGQMNFGGMSVTQQQQQSSSVGING
ANSNQQQQQQMGQQSQLQQQIGQQSQLQQQMGQNQLQQQQLGQQNQLQQQMGQQNQLQQQ
IGQQNQLQQQQIGQQSQLQQQIGQQSQLQQQIGQQNQLQQQLGQSSLQQQQIGQSQLQQS
QMGQMAGGNLSRSALMGQTGHLPMLSGQAAQFNLQNQFLNSPRPKAGFMQGSQFHQGNSP
GQSLQAMGIMGSMNLATQLRANGTLAYAQQRMTANQLRQLTQQNALTTGQQGQNITRTSF
MNAQIAGLAQNGQPGMMQNAISQQQWLKQMPAISSPNTPSYRLQQQRQLLIQQQLAASPL
HQNSVSLNPQQLSQIVQQQTQMGQSQMHQQKQQQQQQQQQQSPIQQQQPPQQQLFHQQQS
PRIAGPGGQKSVSLTGSQPDATGSGATTPGGSSSQGTEASNQLLGKRKIQDLVSQLDLNG
RLDPEVEDLLLEIADNFIDSVTTFACTLAKHRKSSTLEAKDVLLHLEKNWKLTIPGYSSE
EKKHSTDNPPGDVHKKRLDVIRTLIEPAQTEANSGAKQMVRQGSSNQIGQNHMVRPSPSS
EQLVSQSAVPQMLQQNTRF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaattcgccgtcatcgtcttccccaccgaaacccttaccagtgcagcagagc
cccgccatgattgagccttctaattcgcagcaattacagccgctgcaatccccgtcgccg
tcgctcgaccatcagcagcagcagcagcaattggtacagtcacagcagcagcaattggta
caacagccgcaaatggtgcaagcgcagcagcagatggtacaaccccaacagcagcaattg
cagcagctacagcagcagataatgcagcaacagggcaacaccaacagcgtcaatggtggt
ggtagtggcggtaataatttgataggggtttcaaattttcagggtatgcaaaggaatcct
tcaatatctaggcttaatcagatgcagcagagtagtagtattaacagtcaattaggaatg
atgagacaacagcagcaacaacagcaacagaattcgccatcaatttacgggcagatgaat
ttcggtggaatgagcgtgacgcagcagcagcaacagagcagtagtgttggtatcaatgga
gctaatagcaaccagcaacaacagcagcagatggggcaacaaagccaattgcaacagcaa
atcgggcagcagagtcaattgcaacaacaaatggggcagaatcagttgcagcagcagcag
ctggggcagcaaaaccagttgcagcagcagatggggcagcaaaatcagttgcagcagcaa
attgggcaacagaatcagctgcagcagcagcagatcggccagcaaagtcaactgcagcag
cagatcggccagcaaagtcaactgcagcagcaaatcgggcagcagaatcagttgcagcag
caattggggcagagctctttgcagcagcagcaaattgggcagagccaattgcagcagtcg
caaatggggcagatggccggtgggaatttgtcgaggtctgctctgatggggcagactggg
catttgccgatgttatctggtcaagcagcgcaatttaatttgcaaaatcagtttttgaat
tcgccacgtccgaaggcggggttcatgcaagggtctcagttccatcagggtaattctcct
gggcagtccctacaagcaatgggaataatggggtcaatgaatttggctactcaactcaga
gcaaatggcacacttgcttacgcccagcaaagaatgacggcgaaccaactgagacagctt
acacagcaaaatgcacttactactggccagcagggacagaatattacaaggacgtcattt
atgaacgctcaaattgctgggctggctcagaatggacaaccaggtatgatgcagaatgct
atatctcaacagcagtggttaaagcaaatgccagcaatatcctcccccaatactccttca
tatcgtctacaacaacaacggcagctgctcatacagcaacaactagctgcgtcgccgttg
catcaaaattcagtgagccttaacccacagcagttgtctcaaatagtacagcagcaaaca
cagatgggccaatcgcagatgcatcagcagaaacaacaacagcaacagcagcagcagcag
cagtcgccaatacagcaacaacagcctccacaacagcaacttttccatcagcagcagtca
ccaagaatcgcgggacctggaggccagaaatctgtgagtttgactggatcacagccagat
gccactggatcaggagcaactacaccaggtggaagttcaagccaaggcacagaagcaagt
aatcagcttcttgggaagagaaagatacaagatctagtgtcacagttggatttaaatgga
agattggatcctgaagttgaagatctgctgttagagattgctgacaactttattgattcg
gttactacatttgcatgcaccctagcaaaacatcgcaaatcttcaactttggaggctaag
gatgtcttgctgcatttagagaaaaactggaaactgaccattcctgggtattcaagtgag
gagaagaaacacagtactgacaatccaccaggtgatgtgcataaaaagcgtttggatgtg
atacgtaccttgatagagcctgcacaaactgaggcaaatagtggtgctaagcagatggtc
aggcagggatcaagcaatcaaattggtcaaaaccatatggtaagaccttctccaagttca
gagcagttagtttcacagtctgccgtgccccagatgctgcagcagaataccagattctga
DBGET
integrated database retrieval system
