Salvia miltiorrhiza (redroot sage): 131004480
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Entry
131004480 CDS
T09291
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03420
Nucleotide excision repair
smil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131004480
09124 Replication and repair
03420 Nucleotide excision repair
131004480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smil03051
]
131004480
03400 DNA repair and recombination proteins [BR:
smil03400
]
131004480
Proteasome [BR:
smil03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
131004480
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
131004480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
Dsc3_N
Crinkler
CUE
UBA_RAD5A
TECR_N
UBA_3
Ubiquitin_4
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
131004480
NCBI-ProteinID:
XP_057787164
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MKIFVKTLKGSHFPVEVKPEDTVADVKKCIEEVQGSGVYPAAQQMLIYQGKVLKDETTLE
ENKVAENSYVVIMLTKTKASSSGGTASAPPSNAPQPASNTSQPTLPVTAAPSPAPTVAPV
QSAPESSPVPVPSPAPAPSADVYGLAASNLVAGSNLESTVQEIIDMGGGSWDRDTVVRAL
RAAFNNPERAVEYLYSGIPEQAEIPPVAQPPAGGQPVNPSSQATPPAVPPSGPNANPLDL
FPQGLPNMGSNAAGAGTLDFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPQLVRLIQ
EHQADFLRLINEPVEGEGNILGQLAEAMPQAVTVTPEEREAIERLEAMGFDRALVLEVFF
ACNKNEELAANYLLDHMHEFDE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcgtgaagactctgaagggctcgcacttccccgtcgaagtgaaacccgag
gacactgtggcagatgtgaagaaatgtattgaagaagtccagggctctggtgtctaccct
gctgctcagcagatgcttatttatcaaggaaaagttctgaaggatgagacaactcttgag
gagaacaaagttgcagaaaatagttatgtcgtgattatgctgaccaagaccaaggcttca
tcaagtggaggaactgcatctgctccgccatcgaatgctccacaacctgcgagtaataca
tctcaaccaacattgcctgtaacagcagctccttctcctgcaccaactgtggcccccgtg
caatcagctcctgaatcttctcctgtcccagttccttctcctgcccctgctccttcagct
gatgtgtatggtctagcagcatcaaatcttgttgctggaagtaatctggagtccaccgtt
caagaaattattgacatgggaggaggaagttgggatagagatacagtggtccgtgcccta
agggctgcatttaataatcctgaaagagctgttgaatacctctattctggtattccagag
caagcggaaattcctcctgtggctcaacctcctgcaggtgggcagcctgtaaacccttca
tcccaggctacacctccagctgtacctcccagtggtcctaatgctaatcctttggatctt
tttcctcagggtcttccaaatatgggttctaatgcagccggtgctggcacattagatttt
cttcgtaatagtcagcagtttcaagccctacgaaccatggttcaagcaaatcctcaaatt
ttgcagcctatgctccaagaacttggaaagcagaatccacaacttgtaagattgatccaa
gaacatcaggccgacttccttcgcctaataaatgaacctgttgaaggcgagggaaatata
cttgggcaactcgctgaagcaatgccgcaggctgtgactgttactcctgaagagcgggaa
gcaattgaacgccttgaagcaatgggttttgatcgagccttggtactggaagtcttcttc
gcatgcaacaaaaatgaagagctggcagcgaactacttgctcgatcatatgcacgaattt
gatgaatga
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