KEGG   Salvia miltiorrhiza (redroot sage): 131004481
Entry
131004481         CDS       T09291                                 
Name
(RefSeq) ubiquitin receptor RAD23c-like
  KO
K10839  UV excision repair protein RAD23
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03420  Nucleotide excision repair
smil04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    131004481
  09124 Replication and repair
   03420 Nucleotide excision repair
    131004481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:smil03051]
    131004481
   03400 DNA repair and recombination proteins [BR:smil03400]
    131004481
Proteasome [BR:smil03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    131004481
DNA repair and recombination proteins [BR:smil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      131004481
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 Rad60-SLD_2 Crinkler Dsc3_N CUE UBA_RAD5A TECR_N UBA_3 Ubiquitin_4 Ubiquitin_5
Other DBs
NCBI-GeneID: 131004481
NCBI-ProteinID: XP_057787165
LinkDB
Position
Unknown
AA seq 382 aa
MKIFVKTLKGSHFPVEVKPEDTVADVKKCIEEVQGSGVYPAAQQMLIYQGKVLKDETTLE
ENKVAENSYVVIMLTKTKASSSGGTASAPPSNAPQPASNTSPPTLPVTSAPSPAPTVAPV
QSAPESSPVPVPSPAPAPSADVYGLAASNLVAGSNLESTVQEIIDMGGGSWDRDTVVRAL
RAAFNNPERAVEYLYSGIPEQAEIPPVAQPPAGGQPVNPSSQATPPAVPPSGPNANPLDL
FPQGLPNMGSNAAGAGTLDFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPQLVRLIQ
EHQADFLRLINEPVEGEGNILGQLAEAMPQAVTVTPEEREAIERLEAMGFDRALVLEVFF
ACNKNEELAANYLLDHMHEFDE
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgaagattttcgtgaagactctgaagggctcgcacttccccgtcgaagtgaaacccgag
gacactgtggcagatgtgaagaaatgtattgaagaagtccagggctctggtgtctaccct
gctgctcagcagatgcttatttatcaaggaaaagttctgaaggatgagacaactcttgag
gagaacaaagttgcagaaaatagttatgtcgtgattatgctgaccaagaccaaggcttca
tcgagtggaggaactgcatctgctccaccatcgaatgctccacaacctgcgagtaataca
tctccgccaacattgcctgtaacatcagctccttctcctgcaccaactgtggcccccgtg
caatcagctcctgaatcttctcctgtcccagttccttctcctgcccctgctccttcagct
gatgtgtatggtctagcagcatcaaatcttgttgctggaagtaatctggagtccaccgtt
caagaaattattgacatgggaggaggaagttgggatagagatacagtggtccgtgcccta
agggctgcatttaataatcctgaaagagctgttgaatacctctattctggtattccagag
caagcggaaattcctcctgtggctcaacctcctgcaggtgggcagcctgtaaacccttca
tcccaggctacacctccagctgtacctcccagtggtcccaatgctaatcctttggatctt
tttcctcagggtcttccaaatatgggttctaatgcagccggtgctggcacattagatttt
cttcgtaatagtcagcagtttcaagccctacgaaccatggttcaagcaaatcctcaaatt
ttgcagcctatgctccaagaacttggaaagcagaatccacaacttgtaagattgatccaa
gaacatcaggccgacttccttcgcctaataaatgaacctgttgaaggcgagggaaatata
cttgggcaactcgctgaagcaatgccgcaggctgtgactgttactcctgaagagcgggaa
gcaattgaacgccttgaagcaatgggttttgatcgagccttggtactggaagtcttcttc
gcatgcaacaaaaatgaagagctggcagcgaactacttgctcgatcatatgcacgaattt
gatgaatga

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