Salvia miltiorrhiza (redroot sage): 131004752
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Entry
131004752 CDS
T09291
Name
(RefSeq) protein CHROMATIN REMODELING 25 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131004752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131004752
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
131004752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
131004752
NCBI-ProteinID:
XP_057787484
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MRDEDEDETLSTSGDSTGSEPDYHVSPESNGSECDSEDEEMPGTRSAPAPNLRRKSQNVA
ALVRGNLEVNRQSLFPRVYSVVGSEATLRKPFKPPSSFGYSENKEQLARKLSARKRFVPW
GSTRPALVHISNRFGTPNTIENDVPEESESLPPGIEPLVLWQPEESKEQNDEFTFVTVDP
LLVKFLRPHQREGVQFMFDCVSGMLSAENINGCILADDMGLGKTLQSITLLYTLLRHGFD
GKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVKLVALCESTRDDVISGIDSFTSSSSPLQ
VLIISYETFRMHSSKFNQDGSCDLLICDEAHRLKNDQTLTNRALAALSCKRRILLSGTPM
QNDLEEFYAMVNFTNPGVLGDASYFRRYYEMPIVCGREPAASEEEKRLGSERSTELSSKV
NQFILRRTNALLSNHLPPKIVEVVCCKMSPLQSQLYSHFIQSKNVKRAISEEAKQSKILA
YITALKKLCNHPKLIYDTIKGGSPGTSGFEDCLRFFPTSMFSGRSGSWTGGDGAWVELSG
KMHVLSRLLAQLRQKTDDRIVLVSNYTQTLELFAQLCRERRYPFLRLDGSTSISKRQKLV
NRFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV
YIYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEHVDSEMGNLLSTEDLRDLFTFHENTSSE
VHEKMCCNRCRQQEMMSDSILISECLNGGCQIDEEDIGGFAGIAGCSGSLKSHEKQVGAP
KEEDLASWGHHHSPSSVPDLILQASAGDEVSFVFTNQVEGKLVPIESTVRPKIEAVERKG
LSVLKRDLSREAVLPFKNKDMSPAISFRRDSRSSFNFTTLPQPHSKSMRTLEGKTKISLL
PRSSVSFKIPSNRLSPACINDDDFA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgaagacgaagacgaaaccctctcgacttccggcgactccacaggatccgaa
cccgattaccatgtctcgcccgaatcaaatggctccgagtgcgatagcgaagatgaagaa
atgccgggtacccgttcggctccggcgccgaacctccgacggaagtcgcaaaacgtagcc
gccctcgtgaggggaaacctagaagtgaatcggcagtcgctatttcctcgagtttattct
gtagtgggttcagaggccaccttaagaaagccctttaagcctccctcttcctttggttac
tctgagaacaaagagcagttggcacgtaagctttcggctcgcaaacggtttgtgccatgg
gggtccacgaggcctgctctagtccacatttcaaacaggtttggtactcccaatacgatt
gagaatgatgttcccgaggaaagtgaatcactgcctccaggaattgaacctttggtgttg
tggcagccggaagagtccaaggaacaaaatgatgaatttacttttgtaactgtagatccc
ttgcttgtgaagtttctccggccccatcaaagagaaggcgtgcagttcatgtttgattgt
gtttctggtatgctcagtgctgaaaacatcaatggatgcattttggctgatgatatgggg
ttgggaaagacattgcagtcgatcacacttctgtacacccttcttcgtcacggatttgat
gggaaaccaatggttaaaaaagcaataattgtgactcctactagccttgtgagtaactgg
gaggctgaaatcaagaaatgggtcggggaaagagttaagcttgttgctctttgtgagagt
actcgagatgacgtcatctctggaattgatagttttactagttcctcaagccctttacag
gtactgattatttcttatgagacgtttcggatgcattcttcaaaattcaaccaagatgga
tcctgtgacctacttatatgtgatgaggctcacaggctaaagaatgatcaaacattgacc
aatcgagcgctagctgctttatcatgcaaacgacgcattttgctctctggcactcccatg
caaaatgatcttgaggagttctatgccatggttaattttacaaatcctggagttctgggt
gatgcttcatattttcggcgatattatgagatgccaattgtatgtggtcgagagccagca
gctagtgaagaagaaaagagacttggttcagagcgttctacagaactaagttcaaaagta
aaccagtttatattgcgaaggacaaatgcattactgtctaaccacctaccaccaaagata
gtcgaagtagtgtgctgcaaaatgtcgccactccaatctcagctatacagccattttatt
caatcaaaaaatgtaaaaagagcaatttcagaggaagcaaaacaatcaaagatcttagca
tatataactgctcttaagaagctctgcaatcacccaaagctaatatatgatacaattaag
ggtggtagcccaggaacatcaggatttgaggattgtttgcgtttcttcccaacatcaatg
ttctctggaagatctggatcctggactggtggagatggggcatgggttgagctatccgga
aaaatgcatgtattatcccggttacttgctcagcttcgccagaaaacagatgataggatt
gttctagtttcgaattacacacagactttggaacttttcgctcaattatgccgtgaaaga
agatacccttttctaagacttgatgggagtacatcaattagcaaaagacagaagttggtt
aatcgttttaatgacccttcaaaggatgagtttgcctttctcttgagtagcaaagctggc
ggctgtggcctcaatttaattggtggaaatcggctggttctctttgatcctgattggaat
cctgccaatgataaacaggctgctgcaagggtctggagggatggtcagaagaagagagtc
tatatctataggtttttgagtactggaaccattgaagaaaaggtataccagcgtcagatg
tcaaaagaaggtcttcaaaaagttattcagcatgagcatgtagattcagagatgggaaat
ctcctttcaacggaagatctacgcgacttgttcacatttcatgagaacacaagctcggaa
gtacatgaaaagatgtgctgcaaccgctgtagacaacaggaaatgatgtctgatagtatt
ctcatatctgagtgcctgaacggaggctgccaaattgatgaagaggatatagggggattt
gcaggcattgctgggtgctctggaagtttgaaaagccatgagaaacaggttggggctccc
aaggaagaggacttagctagctgggggcatcatcattctccgtcatctgtacctgatcta
atacttcaggcttctgcaggggatgaggtttcatttgtttttacaaatcaagtagaaggg
aaacttgtccctattgaatcaactgtgagaccaaagatagaggcggtagaacgcaaaggc
ctctctgttttaaaaagagacctctcccgagaagcagtattgccatttaagaacaaagat
atgtcgccagcaatctcttttaggagagattcgagaagctcattcaattttacgactcta
ccacagccacactcaaaatcaatgagaactttagaaggtaaaactaaaatctcgctgttg
ccaagaagctctgtgagttttaaaataccttcaaatcggttatctcctgcttgcatcaat
gatgatgattttgcttag
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