Salvia miltiorrhiza (redroot sage): 131005061
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Entry
131005061 CDS
T09291
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131005061
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smil01007
]
131005061
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smil03016
]
131005061
Enzymes [BR:
smil01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
131005061
Amino acid related enzymes [BR:
smil01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
131005061
Transfer RNA biogenesis [BR:
smil03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
131005061
Prokaryotic type
131005061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF3490
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
131005061
NCBI-ProteinID:
XP_057787838
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All DBs
Position
1:complement(65353955..65359220)
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AA seq
511 aa
AA seq
DB search
MGLQSCTFKLSPFSILNLPTALNRLSYRFHHLHCRRQPPHLVRALSSAATAASPQPPTAA
SPEDSKVVKAAQWKAAIDFKWIRDNKEAVAANIKTRNSNANLQFVLELYDKLLTLQKEVE
RLRAERNVVANKMKAKLEPSERQKLIEEGKNLKDVLVTLEEDLLKLTDELQQEAQCVPNM
THPDVPVGGEDCSTVRKVVGKPREFGFAIKDHVQLGKDLDILDFDAASEVSGSKFYYLKN
EAVLLEMGLVNWAVSEVMKRGFTPLTTPEIVRSSIVEKCGFQPRGSNTQVYSIEGSDQCL
IGTAEIPVGGIHMDSILAEASLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKVEMFV
LCRPEESDTFHEELISIEEDLFSSLGLHFKTLDMATEDLGAPAYRKFDVEAWMPGLGRYG
EISSASNCTDYQSRRLGIRYRPELSASMPKKGKGSSGATQFVHTLNATACAVPRMLVCLL
ENYQQEDGTVVVPEPLRPFVGGLQVIDYKYR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggactgcaatcttgcaccttcaaactctctccgttttccattctcaatctccctacc
gccttaaaccgtctctcttaccgattccaccacctccactgccgccgccagccgccgcac
ctcgtcagagcactttcctccgccgccaccgccgcgtctcctcaacctccgaccgctgca
agcccagaagacagcaaagttgtgaaggcggcgcaatggaaggctgcgatagatttcaag
tggataagggataataaggaggccgttgccgccaacatcaagactcgcaattccaatgct
aatttgcaatttgtgctcgagctctatgataaattgttgactcttcagaaggaagtggaa
aggcttcgtgcagagagaaatgtagttgcaaacaagatgaaggccaaactggaaccctct
gagcgtcagaaactcattgaagaaggtaaaaatctcaaagatgttcttgttaccttggaa
gaagacctgctcaaacttaccgatgaactccaacaggaagcacaatgtgtgccgaatatg
acacatccagatgtccctgtaggcggagaggattgctctacagtgagaaaagtggtcggt
aagcctcgtgagtttggctttgctataaaggatcatgtccagcttggaaaagatttggat
atattagactttgatgctgcttctgaggttagtgggtcaaagttctattacctgaagaat
gaagcagttttgttggagatgggcctcgtaaattgggctgtatcagaagtcatgaaaagg
ggctttacacctcttacaaccccagaaattgtccgatcttctatagtggagaaatgtggt
ttccaaccccgtggaagtaacactcaggtttattccattgaaggtagtgatcaatgcctc
attgggactgccgagattccagttgggggaatccatatggattccatacttgctgaggca
tccttacctttgaaatacgtggctttctcccattgcttccgcacagaagctggtgctgca
ggcactgcaactaggggcctttaccgagtccatcaatttagcaaggtagagatgttcgtt
ttgtgcaggccagaggaaagcgacaccttccatgaagaacttattagtattgaggaagac
ctcttctcgtcattgggacttcattttaaaactctggacatggcaactgaggatttgggt
gcaccagcatatcgtaaatttgacgtggaggcgtggatgcctggcttagggcgttacgga
gagatatcaagcgcctctaactgtaccgactatcaaagcaggcgtctggggattcgctat
cgtccagaactctcagcctccatgcctaagaagggaaaaggcagttcaggtgcaacccag
tttgtgcacacgcttaatgccacagcgtgtgccgttccacgaatgctcgtctgcttgctc
gaaaattaccagcaggaggatggcactgtcgtcgttcctgagccactgcggccgttcgtg
ggtggccttcaagtaattgactacaagtataggtag
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