Salvia miltiorrhiza (redroot sage): 131005193
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Entry
131005193 CDS
T09291
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131005193
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131005193
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
131005193
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
DNA_pol_B_N
Prok-RING_4
Rota_NSP3
CHD1-like_C
zf-C3HC4_3
DUF2397
DUF6746
Rtf2
Motif
Other DBs
NCBI-GeneID:
131005193
NCBI-ProteinID:
XP_057788009
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All DBs
Position
1:complement(66736214..66739612)
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AA seq
385 aa
AA seq
DB search
MELNVIQDSFERVAKRQKLSSSKSQEMITQVGYEIEQALARIQSSSDSTVAVDQKTVLAE
LKAKLQVVGSHTHLEGPQRELNTNLSRYQKVLEKAMHPDISKGCVDVDFDRHILNQIIIC
HFYFEGLFDIVDCLVKEAGEPEAISLRLQYQEIHQILEALKSRDLGPASKWISANKERLN
ESGSDLELKLHKLHFVDLLQSKGRADALRYAKTYLAPLASCHMKEIQRLLCSVLWAGRLD
RSPYADLADPSHWENFAEEVMRTSCNFTGQSIRDPLSVVLAAGMEGLPTLLKLANVMAAK
KQEWEAMKQLPVPLELGKEFHFHSIFVCPVSRDQGSEENPPMLLPCGHVLCKQSIHKLSK
ANTRNFKCPYCPHDASFAQCKQLCF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaatgttatacaagattcatttgagagggttgcaaagagacaaaagttgtca
tcttcaaaatcccaagaaatgatcacccaagttggctatgaaattgaacaggcactggca
agaatacaatcaagtagtgattctactgttgcggttgatcagaagacagttcttgctgaa
ctgaaagccaagcttcaggttgttggttcacacactcatttagagggaccgcagcgagag
cttaacacaaatctcagcaggtatcagaaggtgctcgagaaagcgatgcatccggacata
tccaagggttgcgtagatgttgatttcgaccgccatattctaaaccagatcataatttgt
cacttttactttgaaggcctatttgatatcgtcgactgcttggttaaagaagctggggaa
cctgaagctatctcactcagattacagtatcaagagattcatcaaatactggaggctctg
aagtcgagagatctggggccggcctcaaagtggatctccgcaaacaaagagagactgaac
gagtccggttcagatttggagctaaaacttcacaaactgcactttgtggaccttttacag
agtaagggaagagcagacgcgctgagatacgccaaaacatatctcgctcccttggcttct
tgtcacatgaaggagatacaaaggctcctctgtagcgtactgtgggctgggaggctcgac
aggtccccgtatgctgacctggcagatccaagccattgggaaaactttgcagaggaagtg
atgcggacctcgtgcaatttcacaggacaatcgatcagggaccctttgagcgtcgttcta
gctgccgggatggaagggctaccgactctgctaaaactggcgaacgtgatggcagcaaag
aaacaggagtgggaagcgatgaaacagctaccggtgcctctagagttgggtaaggaattc
catttccattccatcttcgtctgccccgttagccgggatcaaggcagcgaagaaaatccg
ccgatgctgttgccgtgcggccacgtcctgtgcaagcagtcgattcataaactatcgaag
gccaacacccgcaacttcaagtgcccttattgccctcacgatgcttctttcgcacagtgc
aagcagctgtgcttctaa
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