Salvia miltiorrhiza (redroot sage): 131005343
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Entry
131005343 CDS
T09291
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131005343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131005343
03036 Chromosome and associated proteins [BR:
smil03036
]
131005343
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131005343
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131005343
PBAF complex
131005343
GBAF(ncBAF) complex
131005343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
131005343
NCBI-ProteinID:
XP_057788246
LinkDB
All DBs
Position
1:68480592..68486417
Genome browser
AA seq
948 aa
AA seq
DB search
MEEKRRDSAGISPPTASAMEASPSEQPISRRRGGLKRKSASINNSGGSSASQTTSSKRQA
REKPQAVPFPPIHMNGPCTRARVQPYNSSSLSEVALLKSEVEAREAAAARAEEVSRLTEN
WEAMEAKIEAEYETIRSRDASAHVVPIHAGWFSWTKTHPLEERMLPSFFNGKSESRTPEI
YMEIRNWIMKKFHLDPNTKVELKHLSELTVGEPDARQEVMEFLDYWGLINYHPFPNQEPA
AMNVDVDANKDESGNIESLVEKLFKFEAVQSWSPVIARMNMNTPSVSSGLLPEAVVADEL
VKSEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCAECYNNGKFGSDMSPLDFILMEPPE
AGGASGGKWTDQETLLLLEAIELFRDNWSEIAEHVATKTKAQCILHFVQMPIEDTFFNHG
DENNDVPKENGASDSISNKNSTPEADKDSDAAPKDAVEKTESQGGSTDNQDSSCPMEISK
VNEVKASDASLEAGESFALKALKEAFEAVCSFPSPGERLCLAEAGNPVMTLAAFLVRLVD
PNIANASVCSLLKSVSSGYSCEQLAARHCFSLEDPPGDEKSSADAEGDATKTPENEPKKD
KDENAEKLEKIPDSVVLLDDGNDGNKDSAPEENNRGDDSASKDQKDAASPKPDGTDRSVT
VKEPDVVATKEEAKSNSQNTPGSSDLPKETVPKDAEESAVSTSQTEVQSNSAKVAGGVAV
AVEGSHSKEPIKEEDMASISESKGADALVISNSTEKDDRAVGDREAKGCGNEKKESEAPK
KYLDSDEKLKRAAVTALSAGAVKAKLLADQEEDQILQLSTFLIEKQLYKLETKLAFFADM
ENVGMRVRELLERSKQRLFHERAQIIATRFGMPPGSARPASQNLPPNRAAGAFPNAASRP
LMGMNSLRPPISRPMMPPNPTSSTMLTGNATGSSMQPNADKLSSVGMK
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagcgaagggactccgccggtatttcgcctccgacggcgtcggcgatggag
gcttcaccgtcggagcagccgatttctcggcggagaggcggtttgaagaggaaatctgcc
tccatcaacaacagcggaggcagctcggcttctcaaacgacgtcttcgaagagacaggcg
agggagaagcctcaggcggttcctttccctccgatccacatgaacgggccctgcactagg
gcacgcgtgcagccgtacaacagcagcagcttgtctgaggtggctttgctgaagagcgag
gtggaggctagggaggcggcggcggcgagggctgaggaggttagtagactgaccgagaat
tgggaggcaatggaggcgaagattgaggctgagtacgaaacgattagatcgagagatgca
agtgctcacgtagtgcctattcatgccggttggttttcatggacaaaaacccatccattg
gaagagagaatgctgccttcattcttcaatgggaaatcagaaagtaggactccagaaata
tatatggagatacgtaattggataatgaaaaagtttcacctggatcctaatacaaaagtt
gagttgaagcatctgtccgaacttactgttggagaaccagatgctcgacaagaggtgatg
gagttcctggactactggggattgattaattatcatcctttcccaaaccaggagcctgct
gctatgaatgtcgatgtggatgctaacaaggatgaatctgggaatattgaatcattggtt
gaaaaactctttaagtttgaagcagtgcaatcatggagtccagttattgccaggatgaac
atgaatacaccatccgtttcgtctggcttgcttccagaagctgttgttgctgatgaacta
gtcaagtctgaaggtccttctgtcgagtaccattgtaattcttgttcagcggattgttca
cggaagcgatatcactgccagaagcaggcagattttgatctctgtgctgagtgttacaac
aacgggaagttcgggtcggatatgtccccattagatttcattcttatggaaccaccagaa
gctggtggtgctagtggagggaaatggacagatcaagaaactcttctgctccttgaagct
atagaattatttagagataactggagcgagattgctgagcatgttgcaacaaagaccaaa
gctcagtgtatattgcactttgttcaaatgccaattgaagatacttttttcaatcatggt
gatgaaaacaatgatgttcctaaggaaaatggggcatcggattccatcagcaataaaaac
tctactcctgaagctgacaaagatagtgatgctgctcctaaagatgccgttgagaaaaca
gaaagccagggtggtagtactgacaatcaggactcatcctgtccaatggagatctcaaag
gttaatgaggtcaaggcatcagatgcgagtcttgaagctggagagagttttgcattgaag
gctctcaaggaagcatttgaagccgtgtgttcttttccttcacctggagaaagattatgc
ttagctgaagctggtaaccctgtgatgacattggctgcatttctagtacgactggtggac
cctaatattgccaatgcatccgtttgtagcctattgaaatctgtctctagtggttattcc
tgtgagcagcttgcagccaggcactgcttctctctggaagatcctccgggtgacgagaag
agttcggctgatgccgaaggagatgcaactaaaacacccgagaatgaacctaagaaggac
aaggatgaaaatgctgaaaaactagagaaaattcctgattcagttgttttacttgatgat
ggaaatgatggcaacaaggattctgctcctgaagaaaataatagaggagatgattctgct
tccaaggaccagaaagatgcagcttctcccaaacctgatggtacagacagatctgttact
gttaaggaacctgatgtagtggctaccaaggaagaagccaaatcaaactcgcagaatacc
cctggtagctctgatttgcccaaggaaacagtgccaaaagatgctgaagaatcagctgtc
tctacatctcaaactgaggttcaatcaaattctgccaaggtagcaggaggtgtagctgta
gctgtggagggctctcattctaaagagcctattaaagaagaggatatggcatccatctct
gaaagcaaaggggctgatgcattggtgatctcaaattcaactgaaaaagacgaccgtgca
gtaggtgatagagaagctaaaggatgtggtaatgaaaagaaagagtctgaagcgccaaaa
aaatatcttgattctgatgagaagctaaaacgagctgcagtgaccgccctctcagctgga
gcagtgaaagcaaagcttctggcggatcaagaagaagatcaaatacttcagctgtccaca
tttctaatagaaaagcagttgtacaagctggagaccaagttggctttctttgctgatatg
gaaaacgtcgggatgagggttagggaactgttggagcggtcgaaacagaggctcttccat
gagagagcacagataattgcaacacgatttgggatgcctccgggatcagctcgtccagct
tcacagaatctacctcccaacagggcagcaggtgctttccccaatgcggcgtctagaccc
ttaatgggcatgaactcccttcggcctcctatttcgagacccatgatgccgccaaatcct
acttcaagcactatgttgactggaaacgccacaggaagttcgatgcagcccaacgcagat
aagctttcttcagttggcatgaagtag
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