Salvia miltiorrhiza (redroot sage): 131005350
Help
Entry
131005350 CDS
T09291
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00061
Fatty acid biosynthesis
smil00071
Fatty acid degradation
smil01100
Metabolic pathways
smil01212
Fatty acid metabolism
smil04146
Peroxisome
Module
smil_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131005350
00071 Fatty acid degradation
131005350
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131005350
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smil01004
]
131005350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smil04147
]
131005350
Enzymes [BR:
smil01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131005350
Lipid biosynthesis proteins [BR:
smil01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131005350
Exosome [BR:
smil04147
]
Exosomal proteins
Exosomal proteins of breast milk
131005350
Exosomal proteins of breast cancer cells
131005350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
131005350
NCBI-ProteinID:
XP_057788255
LinkDB
All DBs
Position
1:complement(68107762..68112735)
Genome browser
AA seq
659 aa
AA seq
DB search
MGDYVVKVEEGRPPADGKPSVGPAYRCIYAKDGLMEIPPAINSPWEFFSESVKKFPKNPM
LGRRQVKDGKAGAYTWLTYQQVYDTTITIGSAMRRRGVNPGDKCGIYGVNSPEWIMAMEA
CNSQAITYVPLYDSLGANAVEFIINHAEVSIAFVHESKLPAILTCLSKCASTLKTIVSFG
DISSKQQQAAEELGVACYSWEEFALLGNSDGDLPPKKKTDTLTIMYTSGTTGEPKGVILS
NGAFMSEVMSMDQLLRETDKAGTEEDVYFSFLPLAHIFDQIIETYCIYSGSSIGFWQGDI
RFLIEDLLVLKPTIFCGVPRVFDRIYTGIMDRISAGGSLKKSLFHVAYSYKLRNLEKGLR
QEEASPLLDKLVFDKIRQGFGGRVRLMLSGAAPLPKHIEEFLRVTCCCVLSQGYGLTESC
GGCFTSIANVFPMIGSVGVPMTTIEARLESVPEMGYDALSALPRGEICLRGNTLFSGYHK
RQDLTNEVLVDGWFHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVESLESTYSRCPL
ITSIWVYGSSFEAFLVAVVVPEAKALEDWAVNSGEKGDFTLLCNNPKARKYILDELNKTA
KQHNLRGFEMLRAVRLEPIPFDIGRDLITPTFKLKRPQLLKHYKDCIDQLYSEAKGTKP
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggggattatgtggtcaaggttgaggaagggcggccgccggccgacgggaagccgtcg
gtggggccggcctaccgctgcatttatgcaaaggatgggctcatggaaattccacctgca
atcaactctccatgggaatttttcagtgaatccgtgaagaaatttccaaagaacccgatg
ctaggtcgccgtcaagtcaaggatggaaaggcgggtgcatacacttggctaacttaccag
caagtctacgatacaactattaccattggttctgctatgcgacgccgtggcgtcaatcct
ggcgataaatgtggcatatatggagttaacagccctgagtggatcatggcaatggaggct
tgtaatagtcaagctattacatatgtaccactatacgattcactcggtgcaaatgcagtg
gagttcattatcaaccatgctgaagtttccattgcttttgtccatgaaagcaagttgcct
gctatactaacatgtctctccaaatgtgcctcaactctaaaaactattgtcagctttgga
gacatttctagtaagcagcagcaggcggctgaagagctaggtgtcgcttgctactcatgg
gaagagtttgctctattggggaattcagacggtgatcttcctccaaagaagaagacagat
acattgacgataatgtacaccagtggcacgaccggggagccaaagggggtcattctatct
aatggtgcttttatgtctgaagtcatgtctatggatcaacttctccgagagacagacaaa
gctggaactgaagaggacgtgtacttttccttccttcctctagctcatatattcgatcaa
atcatcgagacctattgtatttactctggctcatccattggattttggcaaggggatatt
cgtttcttgattgaggatcttcttgtcttgaagccaactatattctgtggtgttcctaga
gtttttgatagaatatacacaggcataatggacaggatttcagctggtggttcactgaaa
aagtcacttttccatgttgcatacagctataaactgaggaatctggagaaagggctcaga
caagaggaagcatctcccctattggacaagctcgtcttcgataagatcagacaaggattt
ggtggacgcgttcgtctcatgctatccggagctgcacctctacctaagcacattgaggag
ttcttgagggtgacatgttgctgtgtcttgtcacagggctatggcctcacagaaagttgt
ggaggatgtttcacatctatagccaacgtgttccctatgataggctcggtgggggttccc
atgacaacgatcgaggcaaggctcgagtccgtgcctgagatgggatatgatgcgctctct
gcccttcccagaggtgaaatttgtctccggggaaacaccttattctccggctaccataaa
cgccaagatctcaccaatgaggtgctcgtggatggctggttccacactggtgatgttggg
gaatggcagcctaatggatccatgaagatcatagacagaaagaagaatatattcaagctg
tcacaaggcgaatatgttgctgtggaaagtctagaaagcacttattcacgatgccctctt
attacatcgatttgggtgtacggtagcagttttgaggcatttctagtggctgtggtggtg
ccggaggcaaaggcacttgaagattgggcggtgaatagtggcgagaaaggggatttcacg
ctcctgtgcaataacccgaaagccagaaaatacattctagacgagctcaacaagactgca
aaacaacataatctccgcgggtttgaaatgttgagggccgttcgcctagagcctattcct
ttcgacattggccgggatttgatcactcccacgttcaagctcaagaggccacagttgctg
aagcattacaaggactgcattgatcagttgtacagtgaagctaaaggtacaaaaccatag
DBGET
integrated database retrieval system