Salvia miltiorrhiza (redroot sage): 131005652
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Entry
131005652 CDS
T09291
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smil01009
]
131005652
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131005652
03041 Spliceosome [BR:
smil03041
]
131005652
Protein phosphatases and associated proteins [BR:
smil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131005652
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
131005652
Spliceosome [BR:
smil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131005652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
zf_CCCH_4
RRM_Nup35
DUF5323
zf-CCCH
Tox-ODYAM1
Motif
Other DBs
NCBI-GeneID:
131005652
NCBI-ProteinID:
XP_057788656
LinkDB
All DBs
Position
1:70458768..70466254
Genome browser
AA seq
965 aa
AA seq
DB search
MELKVSPEKPGFSSSDVASDTEEKEISEGEDEDDDRNHKHRRREARSQSQEGDSVDNRLT
RPYRKRNRPFENGYSYRDGDPQSGEPWRNYNMASDRDFPARFDKRRFNQGSFSKAPSDLN
QRIRGNQILPGEVGFVRGRGREPVPWGIHDSRFGLVDVASQIVQPGPVPSAMFAGRGLSN
VSSAHGTSWNAFGLVPGLPNGGLDSLHPLGLQGPLRPAINPPVNVGLPRQRCRDFEERGF
CLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPGSQLLGASSAQGALTVNHKVFHAKNS
KPGMIVDGFGLNSGVAGGSMAGASTSDVYDPDQPLWANDNPETSAALIALNQANVDETES
FVDMNLPNRHNVESVEGYNDDRPLRNASTGGSQSSSVWGRISNSKRGSEQENKTEKMLNT
DCSNVPNQGKGMNVDGDGSLLKESFPNKQSDFVRDIRTPAQRGLRTLFVSNIPLKDNKRE
SLLSHFQKFGEVINIYIPMQTDRAFVQFSTREEAEEALKAPDAVMGNRFIKLWWANRNNI
PDDAISGNSVAPITPRGISLPPVSNQFALDKGKENPHPTTGKDGNSHHASVGQQPVTDHP
KSAITNGSKAPPLQQKKLESLEILKEELRKKREMLDQKRNEFKRQLDKLQKQAVGSKDMP
ASDSTTKRVKGETPPNQAKAETSKSSPRDSMTIENTRSAQHSVTQTSTSTMHTHELLKPF
RPQAPLGTPFVANRFKLDNRPTVFKVVPPLPPDLANVAALEEHFSSYGDLASVVLEGSEL
QETNDASVSSSDVSARVSFTTRRSAERAFSHGKSWQGHKLQFLWLTSVNTGKEVDSSGNL
PAASSASVNTGKEVDGSGNLPANSSASVNTGKEVDSSGNLPAASSASVNNGKEVDSSGVL
PAASSASSDDNAQPSGDDASVDNQKISVSGSDEPGNHKVEADEDSAEQEKDSKSTSTLSS
GEKQL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaggtttctccagaaaaaccggggttttcatcttctgatgtggccagtgat
actgaggagaaagaaatcagtgaaggcgaagatgaagacgatgatcgtaaccacaagcat
cgtaggcgagaggctcgttctcaatctcaggagggggattctgttgataaccgtttgaca
agaccatacagaaaaaggaatcggccttttgaaaatggttactcttacagggatggtgac
cctcaatcaggtgaaccctggagaaattacaatatggcttcagatagagactttcccgca
aggtttgacaagaggcgtttcaaccagggctccttttccaaagctccttcagatttgaac
caaaggatcagaggcaaccaaattctaccaggtgaagtaggctttgtcaggggtagggga
agggaacctgttccttggggcattcatgattcaaggtttggattggttgatgttgcatct
cagatagttcaacctggacctgttccgtctgctatgtttgctgggaggggcttgtcaaat
gtttctagtgcacatggtacatcttggaatgcatttgggctggttccaggcttacccaac
ggtggacttgactcacttcatccccttggtttgcaaggaccgctaagaccagctatcaat
ccaccagtaaatgttgggcttccacggcaacggtgtagagactttgaggagcgtggtttt
tgcttaagaggagacatgtgtccgatggaacatggtgttaatcgtattgttgttgaagat
gttcagagcctttcacaattcaatctccctgtttcacttcctggctcgcaacttcttgga
gcatcttctgcacaaggagctttgactgttaaccacaaagtttttcatgcaaaaaatagc
aagcctggaatgattgtagatggttttggcctgaatagtggtgttgctggaggttccatg
gcaggggcatcaacatctgatgtgtatgatccagatcaacctttatgggcaaatgataac
cctgagacatcggcagcattaatagcacttaatcaagcaaatgttgatgaaactgagtcc
tttgtggacatgaaccttcccaaccggcataatgttgaatcagttgaaggttataacgat
gatcgtcctctcagaaatgccagtactggtggatctcaaagttcatctgtgtggggaaga
ataagtaattcaaaacgtggctcagaacaggaaaacaagactgagaaaatgctaaacaca
gattgttccaatgttcccaatcaagggaaagggatgaatgttgatggagatggttcactc
cttaaggaatcatttcccaataaacagagtgattttgttcgcgatattcgaacaccagct
caaaggggactccgtactttatttgtcagtaacattcccctgaaagacaataagagggaa
agtcttctctcacattttcagaaatttggtgaggttattaacatttatattcccatgcaa
acagaccgtgcttttgttcaattttctacaagggaagaagcagaagaagcactaaaggca
cctgatgctgtaatgggcaatcggtttatcaagctttggtgggcaaatcgtaataatatt
cctgatgatgcgataagtggcaattccgttgcgccaattacccctcgtggaatttcactt
cctcccgtttctaatcaatttgctcttgacaaaggaaaagaaaatcctcatcctacaact
ggaaaagatggtaattctcatcatgcttctgttggtcaacagccagttactgaccatccc
aagtcagcgattacaaatggttccaaagcccctcctctacagcaaaagaaattggagagt
ttagagattttaaaggaagaacttcgtaagaagcgggagatgctggatcagaaacgaaat
gagttcaagcgccagttagacaaactccaaaaacaagctgttggcagcaaggatatgcca
gcatcagattcaaccacaaaaagggttaaaggtgaaacaccacctaatcaggcaaaagct
gaaacttccaagtcatcaccaagagatagcatgactattgagaacacccgatctgcacag
cattctgtgacacaaacatcaacttcaaccatgcatactcatgagcttttgaaacctttt
cgtccgcaagcacctttagggacaccatttgtagcaaacagattcaagctggataatcgg
cccacagttttcaaagttgttccgccgttaccacctgaccttgcaaatgtcgctgctctg
gaggagcacttctcatcgtatggtgatcttgcttcggtggtactggaagggtcggagctt
caagagactaatgatgcttcagtatcatcttctgatgtttcagctcgtgtttcctttaca
acccggcgatctgctgagagggccttctcacatggtaaatcatggcaaggtcacaagttg
cagtttttgtggcttacgtctgttaacactggcaaagaagtcgacagctctgggaatctc
ccagctgcttcaagtgcgtctgttaacactggcaaagaagtcgacggctctgggaatctc
ccagctaattcaagtgcatctgttaacactggcaaagaagtcgacagctcagggaatctc
ccagctgcttcaagtgcgtctgttaacaatggcaaagaagtcgacagctctggggttctc
ccagctgcttcaagtgcttcgtcggatgataacgctcaacctagtggagatgatgcatcg
gtggataatcagaaaatttctgtctcaggatcagacgaacctgggaaccacaaagtagaa
gctgatgaagattctgctgaacaggagaaagattcaaaatccacatcgaccttatcttcg
ggcgaaaagcagctttag
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