Salvia miltiorrhiza (redroot sage): 131005930
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Entry
131005930 CDS
T09291
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
131005930
04121 Ubiquitin system [BR:
smil04121
]
131005930
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131005930
Membrane trafficking [BR:
smil04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
131005930
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131005930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
Rad50_zn_hook
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
131005930
NCBI-ProteinID:
XP_057789034
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All DBs
Position
1:72917357..72919095
Genome browser
AA seq
395 aa
AA seq
DB search
MSSTYWCYRCNRFVRVWTQDSVNCPDCSSGFIEEIETPNRSSLSDSRRRRFPAAAMYMMR
TPDSGPGSGSGAATGSSPRLRRSRRNGGDRSPFNPVIVLRGPNEGGGGAAAGGGAAAGAG
FELFYDDGAGSGLRPLPASMSEFLLGSGFDRLLDQLAQIETNGIGRIDSNPPASKAAIES
MPTIDISDDHVAIESYCAVCKEAFEVGGEAREMPCKHLYHQDCILPWLSLRNSCPVCRHE
LPTDNENVSVGHDVNEGSRANEVGNDDETVGLTIWRLPGGGFAVGRFSGGRRGGERELPV
VYTEMDGAFNNNGAPRRISWGSRGSISRERGGVRRVFNRLFACFGRGGSSTSTSSSDSRM
SRRSGTGSLSSVISSTSLQRRGWGFEVNDGSERRW
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacctactggtgctacagatgcaaccgcttcgtgagggtttggacccaagat
tccgtcaattgccccgattgcagcagtggattcattgaggaaatcgagactcccaataga
tcttcgctctccgactcgcgaaggcgccgtttccccgctgccgccatgtatatgatgcga
acgcctgattcggggcctgggtcggggtcgggcgcggccacgggctcgagcccgaggctg
aggaggagccgcaggaatgggggcgatcggtcgccgtttaatccggttattgttcttcgc
ggaccgaatgagggtggcggaggagctgccgccggaggaggagctgctgccggagcaggg
tttgaattgttctacgacgacggagcaggatcgggtttaagaccgttgccagctagtatg
tcggagttcttgctgggttctggtttcgataggttgctggatcaattggctcaaattgag
acgaatggaattgggagaatcgacagcaatccgcctgcatcgaaggcagccatcgagtct
atgccaacgatcgatatttccgatgatcatgtagctatcgagtcgtattgcgcggtctgt
aaagaggctttcgaggtggggggtgaggctcgtgagatgccctgcaagcatttgtatcac
caggattgtattctgccgtggctgtcgctgagaaattcgtgccccgtgtgtagacatgaa
ctgccgactgacaatgaaaatgttagcgttggtcacgatgtcaatgaagggagtcgggcg
aatgaggtcgggaacgatgatgagacggttggtttgacgatatggagattgcccggtggc
ggatttgctgtggggaggttttccggtgggaggagaggcggggagagggagctgccggtg
gtttacacggagatggacggcgccttcaataacaatggggcgccgaggaggatttcgtgg
ggttctagaggtagcatatcgagggagaggggtggagtgaggagagtcttcaatcgtttg
tttgcttgctttgggagaggtggatcatcgacttctacctctagctccgactctaggatg
agtaggaggagcggcactggctcgttgtcatcagttattagctctacatcactgcagcga
agaggatggggttttgaagtgaatgatgggagtgaaaggagatggtga
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