Salvia miltiorrhiza (redroot sage): 131006780
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Entry
131006780 CDS
T09291
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131006780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131006780
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131006780
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_NXF1-5
F-box
LRR_14
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
131006780
NCBI-ProteinID:
XP_057789896
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Position
1:16873245..16883623
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AA seq
587 aa
AA seq
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MAYSFPEKVLKHVFSFLSSDRDRNAVSLVCKSWYEIERWSRRRVFVGNCYAVSPEMVIRR
FPEVRAVEIKGKPHFADFNLVPEGWGGYVYPWMAAMAEAYPFLEEMKLKRMVVTDESLEL
ISKSFKKLEVLVLSSCEGFTTDGLASIAANCRHLRELDLSESEVEEQSGDWLTHFPDSFT
SLVSLNMSCIYSEVSFSALERLVARSPHLRTLRLNRGVPLEKLASLLRLAPQLVELGTGA
LSAEFQSHTFSELADAFSACKQLKALSGFWDVVLSYLPAVYSVCSGITWLDLSYAAIPGS
DLVKLISQCQNLQRLWVLDYVEDSGLEAIAASCKDLQQLSVFPSVEPNVALTEQGLVFVS
EGCPKLESVLYFCRQMSNAALIAIARNRPNLIRFRLCIIEPYAHDYLTDEPLDAGFGAIV
EKCKELRRLSISGLLTDLVFKYIGTHAKKLEMLSIAFAGDSDLGLHHLLSGCDSLRKLEI
RDCPFGDEALLANAAKLEGMRSLWMSSCSVSFGACKLLAQKMPRLNVEVIDERGPPDSRP
ESCSVERLYVYRTVASRPRLDMPHFVWTLDQDSSLAHSLAKNLQLRD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggagaaagttttgaagcacgtgttctcgttcctgagctccgat
agagaccggaacgccgtgtcgttggtgtgcaagtcgtggtacgagatcgagcggtggagc
cgccggcgcgtattcgtggggaactgctacgccgtgtcgccggagatggtgatccggcgg
tttccggaggtgagggcggtggagattaaggggaagccgcatttcgcggacttcaatctg
gtgccggaagggtggggcgggtacgtgtacccgtggatggcggcgatggcggaggcgtat
ccgttcctggaggagatgaagctgaagcgcatggtggtgacggacgagagcttggagctc
atctccaagtcgtttaagaagttggaagtgctggtgctgtcgtcttgcgagggtttcacc
accgacggtctcgcctccattgctgctaactgcaggcatctgagggaactagatttgagt
gagagtgaagtagaggagcagagtggggattggcttacccattttcctgatagcttcact
tctctggtgtcactcaacatgtcttgtatatattccgaggtaagtttctcggccttggag
cgactggttgcacgttcccctcacctgaggactctccggctgaaccgcggtgtgcccctt
gagaagctcgctagtctgcttcgccttgcaccccaattagttgaattaggcaccggtgcc
ctttcagctgaatttcaatcccatacattttctgagcttgctgatgcattttcagcctgt
aagcaactcaaggctttgtctggattttgggatgtcgttctctcttatcttccagctgtg
tattctgtctgttccggaatcacttggctggatttaagctatgctgccattcctggttct
gatcttgtcaagcttattagccaatgccagaatttgcagcgtctatgggttttggactac
gtcgaagacagtggacttgaagctattgctgcatcttgcaaggatctgcaacaacttagc
gtcttcccttcggtagaacctaacgtggctttgacggaacaagggcttgtatttgtctcc
gaaggctgccccaagcttgaatctgttctttacttttgccgccagatgtcaaatgctgca
ttgattgctattgcaaggaatcgtcctaacttgattcggttccgcctctgtatcattgag
ccttacgctcatgactacttaaccgacgaaccacttgatgctggttttggggccattgtg
gagaagtgtaaggaactgcgccggctttccatatccggcctcctcactgatctcgtcttc
aaatatattgggacccatgccaagaaattggagatgctttcgatagcctttgctggggat
agtgatttggggctccaccacttgttatctggttgcgacagcctccggaaactggagata
agggactgtccatttggggacgaggctctcttggccaatgctgcaaagctggagggaatg
cgatccctttggatgtcgtcttgctctgtgagtttcggagcttgtaagctgctcgcacag
aagatgcctcggctcaacgttgaggtgatagacgagagaggcccacccgattcaaggcct
gaaagctgctctgtcgagcgactctatgtctaccgcactgttgcttccaggccaaggctt
gacatgcctcacttcgtctggactctggatcaggattcatccctcgcacattccttggcc
aaaaatttgcagctccgtgattga
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