Salvia miltiorrhiza (redroot sage): 131006962
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Entry
131006962 CDS
T09291
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Module
smil_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131006962
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131006962
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
131006962
NCBI-ProteinID:
XP_057790087
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Position
1:21200099..21203029
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AA seq
406 aa
AA seq
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MCCLSSSCFARKHSHHKTRHAKKRAPPTPYIAQKQVLDVEVFGAKADGKSDNSEAFKKAW
DKACNSSESMIILVPKGKIYYVKHINFTGPCHSGISLEIQGTIKSFAQMYDIPRRLWIKF
EDVKNMEIFGGGTIDGNGEVWWKNSCKIKKTKPCQSQSAPTALTFRNCTNLTVSNLKLLN
AQQMHVNFQDCDDVEASRLLVEAPEESPNTDGIHVTRTSNIKILESEIRTGDDCVSIVNG
SRNVDVRNIVCGPGHGISIGSLGEDNTENYVSNIFVKGATFTGTTNGVRIKTWQGGSGIA
RNIVFEDILMRNVHNPIIINQYYCDKNKKCDKEKSAVQVENVVYRNIKGTSASKVAINLN
CSESVPCKNVVLQNVMLSAQQKGDKVEASCNHLAMQTNNLNSLPSC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtttatcctcctcatgctttgctagaaaacattctcatcacaagacgcgccat
gcgaagaaacgagcacctccaactccatatattgctcaaaaacaggtcttggatgtcgag
gtttttggagctaaagctgatggaaaatcagataattccgaggcattcaagaaagcttgg
gacaaagcttgtaattcttcggaatcaatgataattttggtgcctaaaggcaaaatttac
tatgttaagcacattaattttaccggtccctgtcactctggtatttctttggagatccaa
ggaacaatcaagtcttttgctcagatgtatgatatcccaagaagactttggataaagttc
gaagatgtaaagaacatggaaatttttggtggtggaacaattgatggtaatggtgaagta
tggtggaagaattcttgcaaaatcaagaaaactaagccttgtcaaagccaaagtgcacca
acagccctaaccttcagaaactgcacaaatctaacagtaagcaacttgaagcttctgaat
gcacaacaaatgcatgtgaatttccaagactgtgacgacgtagaagcttcgagactttta
gtggaagcaccagaagagagccccaacacagatgggattcatgttacaagaacttccaac
attaagattctagaatctgagatcagaacaggtgatgactgtgtttccatagtgaatgga
tcaagaaatgttgatgtcagaaacatagtttgtggaccaggccatggcatcagcattgga
agcttaggtgaagacaacacagaaaattatgtttcaaatatttttgttaaaggagcaaca
tttacaggaacgacaaatggagtacgaataaagacttggcagggaggcagtggaattgca
aggaatatagtgtttgaagatattttgatgaggaatgttcacaaccccatcatcataaat
cagtactactgtgacaaaaataaaaaatgtgataaagagaaatcggcagtgcaagtggag
aatgtagtatacaggaacataaaaggcacaagtgcttcaaaggtggccataaatttgaac
tgcagtgaatcagttccatgcaaaaacgttgtgctgcaaaatgtgatgttaagtgctcaa
caaaagggagataaagttgaagcttcttgcaaccatcttgcaatgcagactaacaacctc
aattcacttccaagttgctaa
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