Salvia miltiorrhiza (redroot sage): 131007080
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Entry
131007080 CDS
T09291
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00240
Pyrimidine metabolism
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
131007080
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
131007080
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
POR_N
Motif
Other DBs
NCBI-GeneID:
131007080
NCBI-ProteinID:
XP_057790204
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Position
1:23606973..23612688
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AA seq
336 aa
AA seq
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MASWALSRISSLHKHLSPHIPTPKGEGVVKISREVSEALSLGKPVVALESTIISHGMPYP
QNLETAKEVEAIVRQNGAQPATIAILDGVPCIGLSPEELERLAILGRKARKTARRDIAHV
VATGGNGATTVSATMFFASMVEIPIFVTGGIGGVHRHGESTMDISSDLVELGRTPVAVVS
AGVKSILDIPRTLEYLETQGVCAAAYQTSEFPAFFTEKSGCKAPCRVDSPKECARLIEAH
NSLMLRTGILISVPIPSEHSASGNLIESAIQKALKEAREQNITGSSETPFLLARVNELTG
GASLTANIALVKNNARVGAQVAVSLSQLRQGSYKGT
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttgggctctctccagaatcagcagcctccacaaacacttaagcccccatatt
cccactccaaagggtgaaggggtagtcaagatatcccgagaagtttcagaagctctgtcg
cttgggaaaccggtggttgctcttgaatctacaataatttctcatggaatgccatatcct
cagaatttggagacagctaaagaggtggaggccatagtaagacagaatggagctcaacct
gccactattgctattttggatggtgtaccttgcataggtttatctccagaagaacttgaa
aggctcgctattctaggaagaaaagctcgaaagacagctcgcagggacattgcacatgtt
gtagccacaggagggaatggcgccactactgtttcagcaacaatgtttttcgcatccatg
gttgaaatcccaatatttgttactggtggtattgggggagttcatagacatggagaaagt
actatggatatttcttctgatcttgtggagttgggaaggacacccgttgctgtagtttct
gctggtgtgaaatcaatattagatattcctagaacactggaatatttggaaacacaagga
gtttgtgctgctgcatatcagaccagtgagttccctgccttcttcactgaaaagagtggc
tgcaaggcaccttgtcgtgttgactcacccaaggaatgtgctcgactaatagaagcacac
aatagtcttatgctgaggactggaattcttatatcagttcctattccaagcgaacattct
gcttcaggaaacttaatcgagtcagcaatacagaaagctctcaaggaagctcgggagcag
aatattactggcagcagtgaaactccatttttacttgctagagtgaacgagctgactggg
ggagcctccctcactgcaaacattgctcttgtgaaaaataatgcacgggttggcgctcag
gttgccgtctccctttctcagctgcgccaaggaagttataagggtacctaa
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