Salvia miltiorrhiza (redroot sage): 131007260
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Entry
131007260 CDS
T09291
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03010
Ribosome
smil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
131007260
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131007260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
smil03011
]
131007260
04121 Ubiquitin system [BR:
smil04121
]
131007260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smil04147
]
131007260
Ribosome [BR:
smil03011
]
Ribosomal proteins
Eukaryotes
Small subunit
131007260
Archaea
131007260
Ubiquitin system [BR:
smil04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
131007260
Exosome [BR:
smil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131007260
Exosomal proteins of colorectal cancer cells
131007260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ribosomal_S27
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Dsc3_N
DUF2604
Ubiquitin_5
UBL_UBAC1
OTU1_UBXL
Fer2_3
Motif
Other DBs
NCBI-GeneID:
131007260
NCBI-ProteinID:
XP_057790398
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All DBs
Position
1:complement(2288363..2294023)
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AA seq
232 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQ
FYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKTAGD
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcagatattcgtgaaaaccctaacgggtaagaccatcacgttggaggttgaatcctcc
gacacgatcgacaatgtcaaggccaagatccaggacaaggagggcatcccgccggaccag
cagcgcctgatcttcgccggaaagcagctcgaggacggccgcaccctcgccgactacaac
atccagaaggagtccaccctccacctggtcctccgcctccgcggtggcatgcagatattc
gtgaaaaccctaacgggtaagaccatcacgttggaggttgaatcctccgacacgatcgac
aatgtcaaggccaagatccaggacaaggagggcatcccgccggaccagcagcgcctgatc
ttcgccggaaagcagctcgaggacggccgcaccctcgccgactacaacatccagaaggag
tccaccctccacctggtcctccgcctccgcggtggcgcgaagaagcgcaagaagaagacc
tacaccaaaccgaagaagatcaagcataagaagaagaaggtcaagctcgccgtgctccag
ttttacaaggtggatgactctgggaaggttcagaggctcaggaaggagtgccccaacgcc
gagtgcggcgccggaactttcatggcaaaccacttcgacaggcactactgcggtaagtgc
gggctcacctatgtctacaataagactgccggtgattga
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