Salvia miltiorrhiza (redroot sage): 131007295
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Entry
131007295 CDS
T09291
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Module
smil_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131007295
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
131007295
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
131007295
NCBI-ProteinID:
XP_057790421
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Position
1:3280199..3282033
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AA seq
403 aa
AA seq
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MANSLHMMGSLVLGISCLIIINAIAAAGEQRRLLQTETVYDITKYGAKGDGSTDDAMSLI
QAWRAGCDGSAPAKIVVPPGKFMMGEVVLTGPCKAPPPVLIDIQGTILANPDPSSYSNMM
WILIEHVNNVKISGGGTLDAQGTNAWKYAKEDQHMPVSFTFQSSLNGDISNLKFLNAMGF
HSKLIDSENIKVTKMTITAPEESPNTDGIHLSNATNVEITDTVIGTGDDCISIGTGSKNI
LVKNVKCGPGHGLAVGSLGKRPDELSVGNITFSGCTVTGTTNGARIKSYHKSPVLTATNI
VFEDLTMDNVKNPIIIDQHYFSKTTPEQSNVKISDVHFRRIKGTTISEIPIMLNCSLKVP
CENIELADIDLKPVGPAKSVASACQAAVGIKVSGTVNPPPPKC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggctaattctctgcatatgatgggttccctggtcttaggcataagctgtttgatcatc
atcaatgccatcgccgccgctggcgaacaacgccgcctcttgcagactgagactgtttac
gacatcaccaaatacggcgccaagggcgatggctccaccgatgatgcaatgtcgttgatt
caggcatggagggcgggatgcgacggctcggcaccggcaaagatcgttgtgccgccgggc
aaattcatgatgggggaggtggtcctaaccgggccatgcaaggcgccaccaccggtgctc
atcgacattcagggcaccatcttagccaatcccgacccgagctcctactccaacatgatg
tggatcttgatcgagcacgtcaacaacgtcaagatcagcggcggaggcaccctcgacgcc
caaggaactaacgcatggaagtacgccaaggaagaccagcacatgcccgtcagcttcact
ttccaatcgtcgctaaacggggatattagcaacctgaaatttctcaacgccatgggcttc
cacagcaagttgatcgacagcgagaacatcaaggtcaccaaaatgaccatcaccgctccc
gaggaaagccccaacaccgacggaatccacctcagcaacgccacgaatgttgagatcacc
gacaccgtcatcgggaccggagacgactgcatctccatcggcaccggcagcaaaaacatc
ctcgtcaaaaatgtcaaatgcggccccggacacggactcgccgtcgggagcttggggaag
cggcccgacgagctgagcgtggggaacataaccttctccggctgcaccgtcaccggcaca
accaacggcgcccgaatcaagagctaccacaagtcgccggtgttgaccgccaccaacatc
gtcttcgaagatttgaccatggataatgtcaagaacccaatcatcatcgatcaacattac
ttctccaagactactcccgagcaatcgaacgtcaagattagtgatgtccacttcaggaga
atcaagggcaccacaatctcggagattccgataatgcttaactgcagcctaaaggtccct
tgcgaaaacatcgaattggccgacattgatttgaagcctgtgggccccgccaagtccgtt
gcatctgcatgtcaagccgccgtcggcattaaagtttccggtaccgtcaaccctccccct
cccaaatgttga
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