Salvia miltiorrhiza (redroot sage): 131007607
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Entry
131007607 CDS
T09291
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131007607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131007607
03036 Chromosome and associated proteins [BR:
smil03036
]
131007607
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131007607
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131007607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
131007607
NCBI-ProteinID:
XP_057790498
LinkDB
All DBs
Position
2:67606873..67625971
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AA seq
1046 aa
AA seq
DB search
MEVNLALLKPTSIHESQYKRRRVSLNGAATSLSCQLLHDAENSLPTLHCSDYYTKPCISE
LAIREFSNPGYCSRVEDFVIGRVGYGCVKFIGETDVRCLDLDSIVKFRRCEIVIYEDDSS
KPLVGHGLNKPAEVTLLLQTKPLGHLNEAELKKVVEKLKCKAESQGARFISFNPVNREWK
FSVQHFSRFGLGEEDEDDVPMDDVSPGDQDAEGMNGSEVSDDKDNASEYQTLLSHSLPAH
LGLDPDRMKDLRMLLFPTKEDEVEGLTSRLPYDNPPFAKDSSRSPLHHSSRKTVHNSNTP
SIRKTPLALKEYNPGGFSSLSPGAILMSQQNKGLHLTTGKSEGFELDLTKKTPVTGSHSC
NIVDAALFMGRSFRVGWGPNGILVHSGMPVGSDNSQAVLSSVINIEKVALDKVTRDESNK
VKEELTEFCFSSPLNIHKELSCETKKVELGAFNLKLQKVICDRLTLPDICRSYIDIIEKQ
LEVPSLSSATRVLLMHQVLVWELIKVLFSSRKMGGQLKLTEEEADEEVDMIPDVKESYPD
VDQEAVPLIRRAAFSYWLQESVHHRVQEDISSLNELSDLEHIFFLLSGRQMDAAVELAAS
RGDVRLSCLLSQAGGSTASRADIAHQLVLWRKNGLDFSFIEEDRVRLLELLAGNIHRALH
GVKIDWKRFLGLLMWYKLPPDISLPVVFNTYQKLLNEGDAPYPVPVYIDEGPVEDVSNWV
LNNRFDLAYYLMLLHAREENDFGALKTMFSASASTNDPLDYHMIWHQRAILEAIGTFSSN
DLHVLDMAFVSQLLCLGQCHWAIYVVLHMPHREDYPYLQATVIREILFQYCEVWSTHDSQ
WEFIESLGIPLEWLHEALAIFYSYTGDLPKALHHFLECGIWQKAHSIFLTSVAPSLFLSQ
KHTEIWRLATSMEDYKSEIEFWDLGAGIYISFYILKSSMQEDNSTMTELDTLDNKNDACA
VLISHLNKSLAVWGNKLSVEGRAVFSKMAEEISSLLLSDSDEGLPGEDQLNCFETIFRAP
MPEDLRSYHLQDALSLFTCHLSEMAQ
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaaatctagctctgctaaagcctacttcaattcatgagtctcagtacaaacga
agaagagtttctttgaatggtgcagctacttctctttcctgtcagttattgcatgatgct
gaaaattctttaccaacactccattgttctgattactatacaaaaccatgcataagtgag
ttggctatacgtgagttctcaaaccctggttattgcagcagagttgaagattttgtaatt
ggaagggttggttatggatgtgttaagtttattggggaaacagatgttagatgcttggat
ttggattccatcgtcaagttcagaagatgtgagattgttatatatgaagatgacagttcc
aagccgttggtcgggcatggccttaacaagccagctgaagtaactctactacttcaaaca
aagccattaggtcatttgaatgaggcagagttaaaaaaagttgtagaaaaattgaagtgc
aaggcagaaagtcaaggggcacgattcatttcatttaatccagttaaccgtgaatggaaa
ttctcggtacaacattttagtagatttggcctgggtgaggaagatgaagacgatgttcca
atggatgatgtgtcccctggagatcaagatgctgaaggtatgaatggtagtgaggtatca
gatgataaagacaatgcttcagaataccagacactcctttcacattctcttcctgctcat
ctcggtcttgatcctgacaggatgaaagatttgaggatgttgttgtttcctaccaaggaa
gatgaggtagagggtcttactagcaggcttccatatgataatccaccttttgctaaagat
tcctcaagatctcctttacatcattcatccaggaagacagttcataattcaaacacccct
tccattcgcaagactccattagctttaaaggagtataaccctgggggttttagctctctc
tcccctggagctattttaatgtcccaacaaaataaaggtttgcatctaaccacgggaaaa
tctgaaggctttgagctggatcttacaaagaaaacaccagtaactggaagtcattcttgt
aatattgttgatgcagcactatttatgggaagatcctttcgagtaggttggggcccaaat
ggtatacttgtccattctggtatgcctgttggtagtgataattcccaagctgtattatcc
tctgtgatcaatatcgaaaaggttgcacttgacaaagtgacaagagacgagagcaacaaa
gtgaaggaggaacttactgagttttgtttcagctctcccctcaatattcacaaggaattg
agttgtgaaacaaaaaaagttgaactgggagccttcaatctcaaacttcaaaaggttatt
tgtgaccgcttgactcttccagatatttgtcggagttatatagacatcatagagaagcag
ctagaagtgccgagcttatcatctgccactcgtgttctattgatgcaccaagtattggtt
tgggaattaattaaagttctcttttcctcaaggaaaatgggtgggcaattgaagctcaca
gaagaggaggcggatgaggaggtggatatgataccagatgtgaaggaaagttatccagac
gtcgaccaggaagcagttccacttattagacgagctgcgttcagctattggctgcaagag
agtgttcaccatcgtgtacaagaagatatcagttcactaaatgagttgagtgatctagaa
cacatattttttcttctttctggtagacagatggatgctgctgtagagcttgctgcttct
agaggggatgtaagactatcttgtcttttgagccaggctggtgggtcaacagcgagtcgt
gctgatattgctcatcagcttgttctttggaggaaaaatggactggattttagttttatc
gaggaggatagggtgaggcttcttgaattactggctggaaacattcatagggccttacat
ggtgtaaaaattgactggaaaaggttcctaggactattgatgtggtataaacttccaccc
gacatttcattacctgttgtttttaatacttaccagaagcttctaaatgagggagatgct
ccataccctgttccagtttacatagatgaaggacctgtagaagatgtgagcaactgggtt
ttgaataatcgttttgaccttgcttattatcttatgcttcttcatgcccgagaagaaaat
gattttggtgctttaaaaaccatgttcagtgcttctgcctcaacaaatgacccacttgac
tatcacatgatttggcatcagcgtgcaattttagaggccattggcactttcagttcaaac
gatctacatgtccttgacatggcatttgtttctcagttgctatgccttgggcaatgccat
tgggccatctatgtggtacttcatatgcctcaccgtgaagattatccttatcttcaagct
acagtcataagggaaatcctctttcaatattgtgaagtttggagtactcatgactcacaa
tgggaattcattgaaagtctaggcattcctttagagtggttgcatgaagctttggcaata
ttttacagttacactggggatcttccgaaagctctacatcactttctcgaatgtggaatc
tggcagaaagcacactctattttcttaacttcagttgcaccttctctgtttttgtcacaa
aagcatacagaaatatggaggctagctacatccatggaggactataagtcggagattgaa
ttttgggaccttggggcaggaatttatatttcgttctatatattgaagagttccatgcag
gaagacaatagcaccatgacagaactggatactcttgataacaagaatgatgcatgtgct
gtcttaattagccacctgaacaagtctctggcagtttggggcaacaaattatcagtcgaa
ggaagagcggtgttttcaaaaatggccgaagaaatctccagtctgcttctttctgatagc
gatgagggtttgccaggcgaggatcaactgaattgctttgaaaccatttttagggcaccc
atgccggaagacctccgctcgtatcatttacaggatgctctttcacttttcacttgtcat
ctttctgaaatggcacaataa
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integrated database retrieval system
