Salvia miltiorrhiza (redroot sage): 131008671
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Entry
131008671 CDS
T09291
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131008671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
131008671
03009 Ribosome biogenesis [BR:
smil03009
]
131008671
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131008671
Spliceosome [BR:
smil03041
]
Complex A
U1 snRNP components
U1 related factors
131008671
Complex B
131008671
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
Pre-60S particles
Helicases
131008671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
131008671
NCBI-ProteinID:
XP_057791624
LinkDB
All DBs
Position
2:complement(69666491..69672486)
Genome browser
AA seq
699 aa
AA seq
DB search
MAAATAVASSASVRYAPEDPSLPKPWRGLVDGRTGNLYFWNPVTNVTQYERPVASSGVSS
EQSNNALGSSAAQKDPQCRGSHDEGRYSNAGSAKYTSDPEIDQSARNRPDYSQSDPVVAK
NAVHKPIESKGPETGLSVEAYCRRHEISVTGGNVPPFMSFQSTGFPSEILREAQQAGFSA
PTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLKQKRNNPKLGPTILVLSPTR
ELATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLKDLDRGVDIVVATPGRLNDLLEMKRV
YLHQISYLVLDEADRMLDMGFEPQIRKIVKEVPPSRQTLMYTATWPKEVRRIAADLLVNP
VQVNIGNADELVANKSITQHIEVLSQMDKRRRLEQILRSQQPGSKIIIFCSTKKMCDILA
DNLNRQFGAAAIHGDKSQDDRDHVLSQFRTGRSPVLVATDVAARGLDVKDIRVVVNYDFP
TGIEDYVHRIGRTGRAGATGEAYTFFGDQDARHASDLVKILEGANQNVPAELRDLASRGG
GMGRGRRQWGSGPSGRDVGYGGRNDSSYGGRNDSSYGGRGGGGRGGGWGTPSSPDRQDRY
GSESFGHNSNATGSFHQKSFHESMMAASKSRDRSRSRSPNRNSEWANNSSAEKFDGAATN
QRSFHETMMGAAQPPPSLDARASPNDDPQESLPEINLLS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagctacggcagttgcatcttctgctagtgtacggtatgcaccagaggaccct
tcgcttccaaaaccatggagaggactggttgatggtaggactggaaatctttacttctgg
aaccccgtgactaacgtaacccagtacgagagacctgttgcctcctcgggtgtaagctcg
gaacagtctaacaatgctttgggttcatctgctgctcaaaaggacccacagtgccgtgga
tctcatgatgaaggcagatatagcaatgctggttcagcaaagtacacttctgatccagaa
attgaccagtctgccagaaacagaccagattattcacagagtgatccagttgtggcaaaa
aatgctgtgcataaacccattgaatctaaaggcccagaaactgggttgtctgtggaggca
tattgtcgtcgtcatgaaatttctgtaactggaggaaatgtcccgcctttcatgtcgttt
caatccactggttttccttcagagatattaagagaggcacaacaagctggtttctctgct
ccaactccaatccaggcacaatcatggccgattgctatgcaaggtcgtgatattgtggcc
attgccaagacaggatctgggaagactttgggttacttgattcctggatttcttcatctg
aaacaaaagcgaaataaccctaaattaggtccaacaattttggtgctctcaccaacaaga
gagttggccacacagatacaagatgaagcagtgaagtttgggagatcatctaggatatct
tgtacgtgtctgtatgggggtgcaccaaaaggacctcagttgaaagacttagacagaggt
gtggatattgtggtggctactcctggtcgattgaatgatcttttggagatgaaaagagtt
tatctccatcaaatttcgtatttggtattggatgaggcagacaggatgctagacatgggc
tttgaaccccaaataaggaaaattgtgaaggaggtgcctcctagtaggcaaaccttgatg
tacacagcaacatggccaaaggaggtgcggagaattgctgctgatttactggtgaaccct
gttcaggttaacattgggaatgctgatgagcttgttgccaacaagtcaataacccagcat
attgaagttttatcccaaatggataagcgtcgtcgtttggaacagatattgaggtctcaa
caaccaggatcaaagataattatcttttgctctactaagaaaatgtgcgatatcctcgct
gataacctaaaccggcaatttggagctgctgctattcacggtgacaaatctcaggatgat
agggatcatgtgctgagtcaatttcgaactggaaggtccccagtgcttgtagccactgat
gttgctgctcgtggattggacgttaaggatattagggtggtagtaaactatgacttcccg
acgggaattgaggattatgttcatagaattggaagaactggacgagcaggtgccactgga
gaggcttacactttttttggtgatcaggatgcaaggcatgcatcggatcttgtcaaaatt
ctggaaggagcaaatcaaaatgtccctgctgaacttcgtgatttggcatcacgtggtggt
gggatgggaagagggaggcgccagtggggctctggtccttccggacgtgatgtcggatat
ggtggacgtaacgattcttcttatggtggacgtaatgattcttcttatggtggaagggga
ggcggaggaaggggaggaggttggggaacaccatcgtctcctgataggcaggacaggtat
ggttctgaatcgtttggtcacaactcaaatgctactggaagctttcatcagaagagcttt
catgagagcatgatggctgcttccaagagcagagatagaagtcgcagcagaagccccaac
aggaattcagaatgggctaacaactccagcgcagagaaatttgatggagctgccaccaac
cagcgcagttttcacgaaaccatgatgggggcagctcaaccaccaccatctttagatgcc
cgagcctcacctaatgatgaccctcaagagtcattgccagaaatcaacctcctctcctga
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