Salvia miltiorrhiza (redroot sage): 131008717
Help
Entry
131008717 CDS
T09291
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131008717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131008717
03036 Chromosome and associated proteins [BR:
smil03036
]
131008717
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
131008717
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
131008717
COMPASS/SET1 complex (yeast)
131008717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_TEP1_C
WD40_RFWD3
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
WD_LRWD1
MIOS_WD40
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
PQQ_3
RMC1_N
Methyltransf_13
Motif
Other DBs
NCBI-GeneID:
131008717
NCBI-ProteinID:
XP_057791715
LinkDB
All DBs
Position
2:complement(69640286..69644121)
Genome browser
AA seq
332 aa
AA seq
DB search
MTILSELNDDIIRSMSVGAVFSDFGGKINSLDFHRTADVLVTASDDDLVRFYDITNAQLV
KTTYHKKHGADRVCFSHHPSSVICSSKYNLDSNGESLRYLSLYDNRCLRYFKGHKDRVVS
LCMSPVNDSFMSGSLDHSVRMWDLRVNACQGILHLRGRPTVAYDQQGLVFAVAMEGGAIK
LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNVYLLDAYHGEKKCGFN
MDSSANATIEASFTPDGQYVLSGSGDGNIHAWNISDEPNKIASLDSHIGVAACLRWAPRR
VMFAAAAASVLTFWIPDDAKADAEPGAPAPAS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgactatactttccgaacttaatgacgacatcatccgcagcatgtcggttggagccgtc
ttctcagattttggtggcaaaattaattcgcttgattttcatcggacagcagatgtgttg
gttacagcaagtgatgatgatttggttcgattttatgacataactaatgctcaattagtg
aagacaacatatcataagaaacatggggctgatagggtttgtttcagtcaccacccgagt
tccgttatatgctcttcgaaatacaatttggactctaatggagaatccttgagatatcta
tctctatatgataataggtgccttcggtattttaaagggcataaagacagggtggtatct
ctgtgcatgtctccagtcaacgacagtttcatgtctggttcactagatcacagtgtacgc
atgtgggatctacgcgtcaatgcctgccagggaatattacatctgcgaggtaggcctact
gttgcttatgatcaacaaggcttggtctttgctgtggcaatggaaggaggtgcaattaaa
ctatttgattctagatcatatgacaagggtccctttgataccttcctagttggtggggac
actgctgaggtgtgtgatattaaattcagcaatgacggtaaatcaatgcttctgacaact
acaaacaacaatgtatatctcctcgatgcatatcatggggaaaagaagtgtggatttaat
atggactcttctgcgaatgccaccatagaagcatccttcacgcctgatggccaatatgtg
ctttctggttctggggacggaaatatacatgcatggaacatcagtgacgagccaaataag
attgcttctttggatagccacataggtgttgcagcgtgcctgagatgggcacctcgtaga
gtcatgtttgccgccgctgctgcttccgttctaaccttttggattcctgatgatgccaag
gctgatgctgagccgggcgcccctgctccagcctcttga
DBGET
integrated database retrieval system
