KEGG   Salvia miltiorrhiza (redroot sage): 131008717
Entry
131008717         CDS       T09291                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    131008717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smil03019]
    131008717
   03036 Chromosome and associated proteins [BR:smil03036]
    131008717
Messenger RNA biogenesis [BR:smil03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     131008717
Chromosome and associated proteins [BR:smil03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     131008717
    COMPASS/SET1 complex (yeast)
     131008717
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_ACSF4 WD40_RFWD3 NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 CFAP251_N WD_LRWD1 PAC11 MIOS_WD40 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Tricorn_2nd RMC1_N PD40
Other DBs
NCBI-GeneID: 131008717
NCBI-ProteinID: XP_057791715
LinkDB
Position
2:complement(69640286..69644121)
AA seq 332 aa
MTILSELNDDIIRSMSVGAVFSDFGGKINSLDFHRTADVLVTASDDDLVRFYDITNAQLV
KTTYHKKHGADRVCFSHHPSSVICSSKYNLDSNGESLRYLSLYDNRCLRYFKGHKDRVVS
LCMSPVNDSFMSGSLDHSVRMWDLRVNACQGILHLRGRPTVAYDQQGLVFAVAMEGGAIK
LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNVYLLDAYHGEKKCGFN
MDSSANATIEASFTPDGQYVLSGSGDGNIHAWNISDEPNKIASLDSHIGVAACLRWAPRR
VMFAAAAASVLTFWIPDDAKADAEPGAPAPAS
NT seq 999 nt   +upstreamnt  +downstreamnt
atgactatactttccgaacttaatgacgacatcatccgcagcatgtcggttggagccgtc
ttctcagattttggtggcaaaattaattcgcttgattttcatcggacagcagatgtgttg
gttacagcaagtgatgatgatttggttcgattttatgacataactaatgctcaattagtg
aagacaacatatcataagaaacatggggctgatagggtttgtttcagtcaccacccgagt
tccgttatatgctcttcgaaatacaatttggactctaatggagaatccttgagatatcta
tctctatatgataataggtgccttcggtattttaaagggcataaagacagggtggtatct
ctgtgcatgtctccagtcaacgacagtttcatgtctggttcactagatcacagtgtacgc
atgtgggatctacgcgtcaatgcctgccagggaatattacatctgcgaggtaggcctact
gttgcttatgatcaacaaggcttggtctttgctgtggcaatggaaggaggtgcaattaaa
ctatttgattctagatcatatgacaagggtccctttgataccttcctagttggtggggac
actgctgaggtgtgtgatattaaattcagcaatgacggtaaatcaatgcttctgacaact
acaaacaacaatgtatatctcctcgatgcatatcatggggaaaagaagtgtggatttaat
atggactcttctgcgaatgccaccatagaagcatccttcacgcctgatggccaatatgtg
ctttctggttctggggacggaaatatacatgcatggaacatcagtgacgagccaaataag
attgcttctttggatagccacataggtgttgcagcgtgcctgagatgggcacctcgtaga
gtcatgtttgccgccgctgctgcttccgttctaaccttttggattcctgatgatgccaag
gctgatgctgagccgggcgcccctgctccagcctcttga

DBGET integrated database retrieval system