Salvia miltiorrhiza (redroot sage): 131008846
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Entry
131008846 CDS
T09291
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131008846
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131008846
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
131008846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
DEXQc_Suv3
AAA_19
Pyr_redox
DUF6385
Motif
Other DBs
NCBI-GeneID:
131008846
NCBI-ProteinID:
XP_057791910
LinkDB
All DBs
Position
2:complement(70619616..70643144)
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AA seq
2086 aa
AA seq
DB search
MLVELPRLTNSLRSPFDADQAYLNRKSFLQNLNRSSSAAAAGESELARKIIYRWDEGSFE
ARQLYKQFVAAVVELMGGEVVSEEFQEVAIKAYRLFSGTIESEEYERDRRILSKKFELQK
IVGHTVLDANTLKVASLVERLSSLQNKEHGSDYLPELTSEGSEDVEFGADLAFEPPARFL
VEISLDNGEVFLEETGTSSSNHVGWSNNGGSANSHTSIGAGSYDLEWLRDACDRIVRAST
SQLPRDELAMTICRILDSEKPGDEIAGDLLDFVGDSSFEIVQDLIMHRKDLVESIHHGLL
VLKSDRSTSNTQIKYPSYATQVTVQTESEKQIDKLRRKEEKKNRRGTDHGTENDLSSFSF
SSLLQASEKKNILDDLVGHGDGAQSAATALPQGTMRKHYKGYEEVIVPPTPTAPLKPGEK
LIEIKELDDIAQAAFQGYKSLNRIQSRIFQTTYYSNTNILVCAPTGAGKTNIAMIAILHE
IGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLAPLNITVRELTGDMQLSRNELE
ETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVES
TQSMIRIVGLSATLPNYLEVAQFLRVNPETGLFFFDSSYRPVPLQQHYIGISEHNFAARN
ELMNEICFNKVVDSLRRGHQVMVFVHSRKDTGKTAEKLIDMAKLHEDFDLFTNASHPQQG
LIKKDVLKSRNKQLVQYFEYAVGIHHAGMLRADRGLTERLFSEGLLKVLVCTATLAWGVN
LPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYL
RLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGW
DEVVADPSLGLKQRALVSDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIHYSSVET
YNELLRRHMNDSEVIDMVAHSSEFENIVVREEEQNELETLARSCPLEIKGGPSNKHGKVS
ILIQLYISRGAIDSFSLVSDASYISSSLARIMRALFEICLRRGWSEMSSFMLEYCKAVDR
QIWPHQHPLRQFDRDISAEISRKLEERGVDLDHLYEMQEKDIGALIRYAPGGKLVKQYLG
YFPMVQLFATVSPITRTVLKVDLTITPEFVWKDRFHGTSQRWWILVEDSENDHIYHSELF
TLTKKMAKGEPQKLSFTVPIFEPHPPQYFIRAISDSWLHSESFYTISFQNLMLPEAHTTH
TELLDLKPLPVTALANGTYEALYRFTHFNPIQTQAFHVLYHTDQNVLLGAPTGSGKTISA
ELAMLHLFNTQPDMKVIYIAPLKALVRERMNDWRKRLVSQLGKHMVELTGEYTPDLTALL
SADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQ
TERPVRFVGLSTALANAHDLADWLGVEENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMN
SMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQYAASDEHPRQFLAIPEESLQMI
VSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHL
VIIKGTEFFEAKSKRYVDFPITDILQMMGRAGRPQFDQHGKAIILVHEPKKSFYKKFLYE
PFPVESSLREQLHDHINAEIVSGTIRHKEDAIHYLTWTYLFRRLGVNPAYYGVEDTDPGT
LSSYLSSLVVSTFEDLEDGGCIKIEEDRVEPTMLGSIASQYYLKYTTVSMFASNIEADTS
LEVFLHVLSGASEYDELPVRHNEENHNAELSSKVQYMVDKNLLDDPHVKTNLLFQAHFSR
VELPITDYVTDLKSVLDQSIRILQAMIDVCANSGWLSSTIICMHLLQMVMQGLWCNKDSS
LWMLPCMTDDLVSTLSQRGISNVLQLLDAPLDSFHFLTKSSTPSRLHEELQHFPRIQVRL
KVQKRTGADNPGVRLNVRLEKTNRHKKTARAFTPRFPKVKDEAWWLVLANTSSSHLYALK
RVSFKDVSVTNMDIPSTVNDFQGMKLIVVSDCYLGLDQEFPIDQLV
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgttggtggaactcccgcgcttaaccaattctctcaggtcacccttcgatgccgatcag
gcgtatctaaaccgtaaatccttcctccaaaacctgaatcgcagtagttctgcagctgcg
gctggagagtcggaactagcgcgcaagatcatttatcggtgggatgaaggttcttttgag
gcacgccagttgtacaagcaatttgtggcggctgtggttgaattgatgggtggtgaagtg
gtatctgaggagtttcaggaagtggcaataaaagcgtataggctattcagtgggactatt
gaatctgaggagtatgagagggacagaagaattttgtcaaaaaagtttgagttgcaaaaa
attgttggtcatactgttctggatgcaaacacactgaaagttgcatcactggtggagagg
ctttcttctttacagaataaggaacacggatctgactatttacctgaactgacgagcgaa
ggcagtgaggatgtggaatttggagcagatcttgcatttgaacctcctgctcgctttcta
gtggagatttcattggataatggagaagtctttcttgaggaaactggcacatcatctagc
aatcatgtgggatggtccaataatggtggctctgcaaattcccatacttctattggcgct
ggtagttatgacctagagtggttgagagatgcatgcgatagaatcgtcagggcaagtact
tcacagctccctcgagatgaactagcaatgaccatttgcaggattcttgattcagagaaa
cctggagatgagattgccggtgatctgctggattttgttggtgatagctcattcgaaatt
gttcaggaccttattatgcacagaaaggaccttgttgaaagcatccatcatggacttctc
gtcctgaaatctgatagatcaacttcaaacacacagattaaatatcctagttatgctact
caggtaactgttcaaacagagtctgagaaacaaattgataaacttcggcgcaaggaggag
aaaaagaataggcgtggaacagatcatggaactgagaacgacttgtcttctttttctttc
agttccttactccaagcaagtgagaagaaaaacatacttgatgatcttgtggggcatggt
gatggggctcagtctgctgccactgcccttcctcagggcacaatgaggaagcattacaag
ggatatgaagaagtcattgttcctcctacaccaactgcaccactgaaacctggggagaag
ctgattgaaatcaaggagctagatgacatagcacaagctgcttttcaaggttacaagtcc
ttaaaccggatacagagcagaatattccaaacgacttactacagcaacacaaatatactg
gtctgtgcgccaactggggctggaaaaaccaacatagctatgattgctattctacatgag
attggacaacactttaaagatggttatttgcataaagatgaattcaagatagtttatgtt
gctcctatgaaggcgttagctgcggaggtcacatcaaccttcagccatcggttggcccct
ctaaatataactgtgagagaactaactggtgatatgcaactctcaagaaacgagcttgaa
gagacacagatgattgtaacaactcctgaaaagtgggatgtcattactcgtaaaagcagt
gatatgtcactctccatgctcgtgaagctcctaataattgatgaagtacatttgttgaat
gatgacagaggtcctgttattgaagcattagtagctcgcaccctccgtcaggttgaatct
acacaaagtatgattcgcattgttggcctttctgccactctaccaaattatctggaggtt
gcacaatttctgagggtaaatccagaaactggcctattcttctttgactcaagctatagg
ccggtacctcttcaacagcattacattgggatttctgaacacaactttgcagctcgtaat
gaattgatgaatgagatatgcttcaataaggtggttgactcactaagacgaggacatcag
gttatggtttttgttcattcacgtaaagacacaggaaaaactgctgaaaagctgattgat
atggccaaattacatgaggacttcgaccttttcacaaatgcttcacatcctcagcaggga
cttataaagaaagatgtattgaagtccagaaataagcagttggtgcaatattttgaatat
gctgttggcatccatcacgctgggatgctacgcgcggacagaggtctgactgagcggctt
ttctctgagggacttttaaaggtcctcgtttgcacagcaactttggcttggggagtaaat
ctacctgctcatactgtggtgattaagggaactcaaatttatgacccaaaggccggtggg
tggcgagatctcggcatgcttgatgttatgcagatatttgggcgtgctggtagaccccaa
tttgataaaagtggtgaaggcattataatcacaagtcatgaaaaattagcctactatttg
cggcttttaacgagtcaacttcccattgagagccagtttataacctctttgaaagataac
ctgaatgctgaggtggcattgggcactgtgacaaatgttaaggaagcttgtgcttggctg
gggtacacatatcttttcataaggatgaaaatgaatcctctggcatatggtattggatgg
gatgaggtagttgcagatccatcactaggcctgaaacaaagagctctggtatcggatgca
gcacgggctctcgacaaggcaaaaatgatgcgcttcgatgagaaaagtgggaacttctat
tgtactgagcttggtcgcatagcaagccacttttacattcattattctagtgtcgaaact
tataatgaattgttgagacgccacatgaatgatagtgaggtgattgacatggttgcacat
tcttctgaatttgaaaatattgttgtccgggaggaggaacaaaatgagctggaaacgttg
gctcgctcatgtcctttggaaatcaagggtggtccttcaaataaacatggaaaagtgtct
atccttattcagctgtacatatccaggggagcaattgattctttttcactagtttctgat
gcatcgtacataagttcaagtttagctcgtattatgcgagctttatttgagatttgtttg
cggagaggatggagtgagatgtcttcattcatgctggagtactgcaaagctgtggatcgt
cagatttggccccaccaacatccactcagacaatttgatagagatatttctgcagaaata
tcgagaaagcttgaagaaagaggggtggacttggatcacctatatgagatgcaggagaaa
gacattggagctttaattcgctatgcacctggaggaaagttggtgaagcaatacctggga
tatttcccaatggtccagttatttgctacagtaagtccaataacaagaacagttctaaag
gttgatttgactattacacctgagtttgtctggaaggatcgttttcatggtacttcacag
cgctggtggattttagttgaggattctgagaatgaccatatataccactcggagctgttt
acattaacaaagaaaatggccaaaggggaacctcagaagctctccttcactgttccaata
tttgagccacatcctccccagtacttcatccgagcaatttctgattcatggttgcattca
gagtctttctacactatatcctttcagaacctcatgctcccagaggctcatacgactcat
acagaactccttgacctgaaaccacttcccgtgactgcacttgccaatggaacttatgaa
gcattgtacagattcacacattttaaccccatacagacgcaggcttttcatgtactatat
cacacagaccaaaatgttcttcttggagctccaacaggaagtggtaaaactatatcagct
gagcttgccatgctccatctgtttaatactcagcctgatatgaaggttatttatattgca
cctttaaaggctcttgttcgagaaaggatgaatgattggagaaagcgtcttgtttcccag
cttggaaaacatatggtggagttgacaggggagtatactccagatttgacagctttgtta
tcagctgatataataatttctactccagaaaaatgggatggtatcagtcggaattggcat
tctcgatcctacgttacgaaggttgggctaatgatattggatgagattcatttacttggt
gctgatcgcggacccatattggaggtaattgtttctcgaatgagatatatatcatcacaa
acagagcggccagttcgatttgttggtctttcaacagctttagcaaatgcacatgatttg
gctgattggctgggtgttgaagaaaatggcttattcaacttcaagcctagtgttaggcca
gttcctcttgaagttcatatccagggatatcctggaaagttttactgcccaagaatgaat
agcatgaataaaccagcatatgcagcaatatgtactcattcaccaacaaagccagttctt
atatttgtgtcatcccgtcgtcagactaggcttactgccttggacctcattcagtatgca
gcttcagatgagcacccaagacaattcctagctatacctgaagaatcgcttcagatgata
gtctcccaagtaactgatcagaaccttagacacactctgcagtttggtattggattgcac
catgcaggattgaatgataaggatagatcacttgttgaggaactttttgcaaacaacaag
attcaggtgttggtctgcaccagtacattagcttggggtgtgaaccttccagctcattta
gttatcataaagggaacagagttttttgaagcaaaatcaaagagatatgttgattttcca
attacggatattttacaaatgatgggtcgagctggacggcctcaattcgaccagcatggg
aaagccattattctggttcatgaacccaaaaagagcttctacaaaaagtttctttatgaa
ccatttccagttgaaagcagcttgagagaacagttgcatgatcacataaatgcagagata
gtttctgggacaattcgtcataaagaggatgcaatacattatctcacctggacgtattta
ttccgtagattgggggttaatccagcgtattatggcgttgaggacacagatccagggact
ctaagttcttacttgtcaagcttagtagtgagcacatttgaggatcttgaagatggtggt
tgcattaaaattgaagaagacagagtggagccaacgatgttgggttcaatagcatctcaa
tattatctgaaatacacaaccgtttctatgtttgcctcaaatatcgaagcagacacatca
ctggaagttttcctccatgtattgtctggtgcttctgaatatgatgagcttcctgtgcgg
cacaacgaagaaaaccacaatgcagaattgtccagtaaggtccagtacatggttgacaag
aatcttcttgatgacccgcatgtgaagaccaatcttctgttccaggcacacttttcccga
gttgaactgccaatcactgactacgtaacagacttgaagtctgtgctggatcaaagtata
cgtattcttcaggcaatgatagatgtatgtgcaaacagtggatggctctctagtacgatt
atttgtatgcatctccttcaaatggtcatgcagggtttatggtgcaacaaagattcatcc
ttatggatgctcccatgcatgacggatgatcttgttagtacattgagccaaagaggaatc
tcaaatgtcttgcagttattagatgctcctcttgactcctttcattttctcactaaaagt
tccactccctcgaggttacatgaggaactgcagcattttcctcgcattcaagtgcgattg
aaggttcaaaagcgcactggcgctgataaccctggtgtccgtctgaatgttagattggaa
aaaactaataggcataagaaaacagctagagcttttactcctcgctttccaaaggttaaa
gatgaagcttggtggttggtcctggcaaatacctcctcctctcatctatatgcattgaag
agagtttctttcaaggatgtctcagttacaaacatggatatcccgtcaactgtgaacgac
ttccagggtatgaagttgatcgtggtttcagattgttatcttggtttggatcaagaattc
cctattgatcaactcgtgtga
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integrated database retrieval system
