Salvia miltiorrhiza (redroot sage): 131008887
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Entry
131008887 CDS
T09291
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131008887
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131008887
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131008887
NCBI-ProteinID:
XP_057791971
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Position
2:70961540..70963494
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AA seq
436 aa
AA seq
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MDSIRFMLVFLISLVVLITTKANRTESDDVVWRKRALLARRAAQEAYQPNPDIVLNHFNK
HVHKSLEGTNTTRRNLTAIPHVGCEATNPIDQCWRCDKNWETNRKKLADCALGFGRHVTG
GKAGKIYVVTDPSDNDLVNPKKGTLRHAVIQTEPLWIIFARNMVIRLSQELIVTCNKTID
GRGAQIHITKGAGFTIQYVSNIIIHNIKIYDIKVGNGGMIRDSLSHYGQRGQSDGDAISV
FGSSNIWLDHLSLSSCYDGLIDVVKSSTAVTISNCHFARHNDVLLFGASDSYSDDKIMQV
TVAFNHFGKGLIQRMPRVRWGFAHIVNNDYTKWEMYAMGGSQGPTILSQGNRFVAPDNKA
AKEVTKREYTAESVWKNWVWKSEGDVMQNGAFFVQSGDPHHKFVQGAETIAPKPGHFAST
LSRYAGHLKCIPGKPC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggattccattaggtttatgttggttttcttgatttctcttgtggtcttgatcaccaca
aaggcaaatcgtactgaatcggacgacgtcgtttggcgaaagcgcgcattactagccagg
cgagctgctcaagaggcctatcaaccaaatcctgatattgtactaaatcatttcaataag
catgttcataagtccttggaaggaacaaacacgacaagaagaaacctaaccgcaatccct
cacgtgggatgcgaggccacaaaccctatcgaccaatgttggaggtgcgacaaaaattgg
gaaacaaaccggaaaaagctagccgattgcgccctagggttcgggcgccacgtgaccgga
ggcaaggccgggaagatctacgtggtgacggacccctcggacaacgacctagtgaaccct
aaaaagggaaccctgaggcacgccgtgatccagacggagccgctgtggatcatattcgcg
cgcaacatggtgatccggctctcgcaggagctgatcgtcacgtgcaacaagaccatcgac
gggcgcggggcccaaatccacatcaccaagggcgccggcttcaccatccaatacgtgagc
aacatcatcatacacaacatcaagatctacgacatcaaggtgggcaacggcggcatgatc
agggactcgctctcccactacggccagcgcggccagagcgacggcgacgccatttctgtg
ttcggatcctccaacatctggctcgaccacctgtccctctccagctgctacgatggcctc
atcgatgtcgtcaaatcctccacggccgtcaccatctcaaattgccatttcgctcgccac
aatgatgttttgctatttggggcaagtgatagctactcggatgataagatcatgcaagta
acggtggcgtttaaccattttgggaaagggttaatacagagaatgccgcgggtgaggtgg
gggttcgcgcacatcgttaacaacgactacaccaagtgggaaatgtacgccatgggcgga
agccaaggccccaccatactcagccaaggcaaccgctttgtcgccccggataacaaggcc
gccaaagaggtgacgaagagagaatatacagcggagagtgtgtggaagaattgggtgtgg
aaatcggagggagatgtgatgcaaaatggggcatttttcgtgcaatctggagatccgcat
cacaagtttgtacaaggcgctgagactattgcacctaaacctggccactttgcaagcacg
ctttcgcgatacgccggccatttgaaatgcattcccggaaagccttgctaa
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