Salvia miltiorrhiza (redroot sage): 131008913
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Entry
131008913 CDS
T09291
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smil03032
]
131008913
03400 DNA repair and recombination proteins [BR:
smil03400
]
131008913
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131008913
DNA replication proteins [BR:
smil03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
131008913
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
131008913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
UBA_7
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
131008913
NCBI-ProteinID:
XP_057792008
LinkDB
All DBs
Position
2:72299359..72307057
Genome browser
AA seq
870 aa
AA seq
DB search
MDGNDVTSDKVIAELVDMGFDILDIAEAIKAVGPSLDNAIELILNSSRRNDRNASTSSMC
LTDNKVTGKRASSSLQPSAKLRQRNITEQLKLSSASKRSKMTGVYNASVSARNFLTRGKE
PVVPSTVDTGLDHCQETGMVPSYCKDEKIIGLDWERKATNLLQKNFGYSSLKGFQKEALA
AWMANQDCLVLAATGSGKSLCFQIPALLSGKVVVVISPLISLMHDQCLKLGKLGISACFL
GSGQLDKCVENKAMNGAYSIIYVCPETILRLMKPLQSLAESRGIALFAIDEVHCVSKWGH
DFRPDYRRLSILRESFSAENLKCLKSDIPLMALTATATIRVREDILKSLCMSKEMKIVTT
SFFRPNLRFSVKHSRTSGSNYEKDFNELIKLYTKEKKALQKLVLNNLDGGSKTSSCSPNG
STSGIDRMCRNMNDSDDSDDDDFLDCPEEELSVQYLEDDCDRVEGVDDLDVFCGESCGPP
SLDFRSCGTSDSNNLMSKAGKRPALHQRYLEEGPTIIYVPTRKQTLSLTKFLTNFGVKAA
AYNAKLPKSHLRQVHGQFHADELQVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEA
GRAGRDGELADCVLYANLSRIPTLLPSKRSEEQTKQAYQMLSDCFRYGMKSSCCRAKMLV
EYFGEEFSTGGCNLCDVCTNGPPEIQDLKEEATLLLRLIATYHENNTCQIELSNDVVAQS
SQAMMLRENPNISAFVRMIREQNQKYATSDFTWWRGLARILEERGFIREGDEMKRVQIKL
PKATNSGLQFLKCDSQQSFLVYPEADMLLSTERCKSFSSFSEWGKGWADPEIRRQRLQRR
KESTKPRRRRVPCKPNLSTVRGRLSAKLGK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaatgatgtgacttcagataaagtcattgccgaattggttgatatggggttt
gatatcttagacattgcagaagccataaaagcagtgggtccgtcactggataatgcaatt
gaattaatcttgaatagctctcgtagaaatgacaggaatgcatcaactagttcgatgtgt
ctcacagacaacaaagttactgggaaaagagccagttcctcattgcaaccttctgctaaa
ctgcgacaacggaacataacagaacaactgaaattgtcatctgcatccaaaagaagcaag
atgacaggtgtatataatgcatcagtctctgctagaaacttcttgacacgtggaaaagaa
ccagttgttccttcgactgtagatactggtttggatcactgtcaagaaactggcatggtg
ccatcttattgcaaagatgaaaaaataattggattagattgggaaaggaaggcgactaat
cttcttcagaagaattttggatattcatccttgaagggctttcagaaagaggctctggca
gcctggatggctaaccaagattgtctagttcttgcagcaacaggatctggaaaatcatta
tgctttcagattccagcattattatctggaaaggtggtggtggttatctcaccgttaatt
agcttgatgcatgaccagtgcttgaaactaggaaagcttgggatttcagcttgtttcctt
ggatctggtcaacttgacaagtgtgttgaaaacaaagcaatgaatggtgcatatagcatc
atttatgtctgcccagagactattttaagattaatgaaaccgcttcaaagccttgctgaa
agccgtgggattgcattatttgcaattgatgaagttcattgtgtttctaaatggggtcat
gattttcgacctgactacaggcgactgtccatattaagagagagcttcagcgctgagaac
ttgaaatgcctgaagtctgacattcctttgatggctttgactgctactgcaactattcgt
gttcgtgaagacatattaaagtcattatgcatgtcaaaggagatgaaaattgtcacgaca
tcatttttccgaccaaatctacgtttttcggtaaagcatagtagaacatctgggtctaac
tatgagaaggatttcaatgagttgattaaattgtacacgaaggagaagaaagcactccaa
aaattggtactgaacaatcttgacggtggctctaaaacctcaagttgttctccgaatggt
agcacatctggaatagatcgaatgtgcagaaatatgaatgatagtgatgattcagatgat
gatgattttctggactgtccggaggaggaattgtctgtccaatacctggaagatgactgt
gatagagtggaaggagtcgatgacctggatgttttttgcggcgaatcttgtgggcctcca
tctctagatttcagaagttgtgggacttctgactccaacaatctgatgagtaaagcaggg
aaaagaccagcactccatcaaagatatctggaagaaggaccaacaataatatacgtacct
actaggaaacaaactttgagcttaactaagttccttacgaattttggtgtaaaggcagct
gcttataatgccaagttgccaaagtcacatcttaggcaggtgcacggacaatttcatgca
gatgagttacaggttgttgttgctactattgcttttgggatggggattgacaagtccaac
gtcagacggatcattcattatggttggccacagagcttggaagcatattaccaagaagct
ggtcgggcaggtcgggatggagaattagcagactgtgtcctatatgctaatctatcaaga
atacctactcttttaccaagtaaaagaagtgaagagcagacaaaacaagcatatcagatg
ttatctgattgcttcaggtatggaatgaaatcatcttgttgtagagccaaaatgcttgta
gaatactttggtgaggagttctctactggcggatgtaatttatgtgatgtctgtaccaac
gggccaccagaaattcaggatctgaaagaggaggcgacactgctcttgcggcttattgcc
acgtatcatgaaaacaatacttgtcaaattgaattgtctaatgatgttgtggcccagagc
tcccaggccatgatgttgagagagaacccaaatattagtgcatttgtccgtatgataaga
gaacagaaccaaaaatatgctacaagtgacttcacatggtggcgtggtcttgctcgtata
ttagaagaaagggggtttatacgcgagggagatgagatgaagcgcgtccagataaagctt
ccgaaagcaacaaattcgggtctgcagtttttgaagtgtgattcgcaacaatcatttctt
gtttacccagaggcagacatgctgctctccacagaaaggtgcaaatcattctcgagtttc
tcagagtgggggaaaggctgggcagatcctgagattcgtcgccagcgcttacaaaggaga
aaggagtcgacgaagcctcgcagacgaagagtaccctgtaagcctaacttgagcacagtt
cgagggagactatctgctaaactcggaaaatag
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