Salvia miltiorrhiza (redroot sage): 131008930
Help
Entry
131008930 CDS
T09291
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smil01009
]
131008930
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131008930
Enzymes [BR:
smil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
131008930
Protein phosphatases and associated proteins [BR:
smil01009
]
HAD phosphatases
Fcp/Scp phosphatases
131008930
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
131008930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
CEPT76_peptidase
Motif
Other DBs
NCBI-GeneID:
131008930
NCBI-ProteinID:
XP_057792033
LinkDB
All DBs
Position
2:71661616..71665960
Genome browser
AA seq
629 aa
AA seq
DB search
MAKDESLTVKDAVHKLQLFLLDGIKDDNQLLAAGSVISRDDYNDVVTERTIAEMCGYPLC
ANPLPSERPHKGRYRISLKEHKVYDLQETYMYCSSNCLINSRAFAANLQEERSSALNPAK
LNRILKLFESLSSETAVDMGKNGDLGFSELKIQEKTDREAGNRSLEEWIGPSNAIDGYVP
RSDKNLDSHQSHNDRKGGKQGKGPKHRLSDPNAQDIMSFEMNFTSTIITQDEYSVSKAAP
TMRANESRGKLRTKTVNCDKKEIQPQKSDKCMNANGADDKGNVSEDNSSAGRSHDTGASI
LRSSLKTSDSKKSMRYVTWADEKTDFDGQNLEECQESKGEKAAPVTPQSVVEEVGEEEEY
RFSSAEACAEALSQAAEAVASGKSDASDAVSEAGVIILPPPHGVDTAKSEENADIIDTDP
VQLKWPPKPGVLSSDLFDSEDSWYDSPPEGFNLQLSPFSTMFMALFSWLSSSSLAYIYGK
EESFHEEYMSVNGREYPHKIVLSDGRSSEIKHTLAGCLARALPTLVTELRLPVPVSTLEQ
GLGRLLDTMSFIDPIPAFRMKQWHVIVFLFLEALSISRIPSLTQYMLGRRILLPKVLEGA
QISSEEFEIMKDLVIPLGRAPQFSTQSGG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggatgaatcactgacagtgaaggatgcagttcataagcttcaactcttcctt
ctcgatggaatcaaagacgacaaccagctattagctgctggttcagtgatatcccgagat
gattacaacgatgtagtcaccgagcgcacgatagctgaaatgtgcggttacccgctctgc
gccaacccattgccatccgagcggccgcacaaggggcgttaccgcatctcactcaaggag
cataaagtctacgaccttcaagagacatacatgtattgctcgagtaattgtttgatcaac
agtcgagcgtttgctgcaaatttgcaggaagagaggtcctcggcactgaaccctgcaaaa
ttgaaccgaattcttaagctatttgaaagcttgagttcggaaactgcggtggatatgggc
aagaacggagacttagggttttccgagttgaagattcaggagaaaacagatagggaagca
gggaatcgatctctggaggagtggattggtccgtcaaatgcgattgatggctatgtgcca
cggagtgacaaaaacctggactcccatcaatcgcacaacgacagaaaaggtgggaagcag
ggaaaagggcctaaacatcggctttctgatccaaatgcgcaagacattatgtcctttgaa
atgaacttcacaagtactattattactcaagatgagtatagcgtttccaaagctgctccg
acaatgagggctaacgaatcaagagggaaattgagaactaaaactgtaaattgtgacaaa
aaggaaattcaaccccaaaagtctgataaatgtatgaatgcaaatggagcagatgacaag
ggtaatgtatcagaggataattctagtgctggccgaagtcatgataccggggctagtatt
ctgaggtcctctttaaagacttcagattcaaagaaatcgatgcgctatgttacctgggct
gacgagaagactgattttgatgggcaaaatcttgaagagtgtcaagaatcaaaaggtgaa
aaagcagctccagtaacacctcagtcagtggttgaggaagtcggtgaggaggaggagtac
agattttcatctgctgaagcctgtgcggaggctctaagccaggctgcagaagctgttgca
tcaggaaaatcggatgcatctgatgctgtatctgaagcgggtgtaataatattaccacct
cctcatggagtggatactgctaaatctgaagagaatgctgatattatcgacacagaccca
gtgcagttaaagtggcctcctaaacctggagttttaagctctgatttgtttgattctgag
gattcttggtatgatagtcctccggaggggttcaacttgcaattgtcacctttttcaaca
atgtttatggcactcttttcctggttatcatcgtcctctctagcatatatatatggaaag
gaagagagtttccatgaggaatacatgtcagtcaatgggagagagtatcctcacaagatt
gttctgtcagatgggcgctcctccgagattaagcatactcttgctggctgccttgctcgg
gccttgcccactcttgtgactgaactcaggcttcctgtaccagtttcaacacttgagcaa
ggactggggcgcttactagatacaatgtcttttatcgatccaattcctgcatttaggatg
aaacagtggcatgttattgtcttcttgtttctagaggctctttctatcagtagaattccg
tctctgacgcaatacatgttgggtagaagaattctacttcccaaggtcctcgagggtgca
cagattagttccgaagaatttgagataatgaaggatctggtcattccactcggccgagca
cctcagttctcaactcagagtggaggctaa
DBGET
integrated database retrieval system
