Salvia miltiorrhiza (redroot sage): 131008933
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Entry
131008933 CDS
T09291
Name
(RefSeq) ATP-dependent DNA helicase Q-like 1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131008933
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131008933
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
131008933
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
131008933
NCBI-ProteinID:
XP_057792037
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Position
2:72084279..72090658
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AA seq
625 aa
AA seq
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MDGDDLELEKARLISLALEFGFDEDSANNCLDRLVQLYGDDGRDFITVEHCGDDFLASLA
EFMQETEAEDWDDVQAMESEACGALTEILDKDLPKNYDSEDKEKRSKIHVIEDSPESQKH
HNVMHLDTSSDSEEASYNISGKRLKSSSSIALNGTGWDPSPSSVKPPSISAYRNDPTRSS
GSSVSHETWNSSLYENSGSLTYDELQKLDDFELANIVVFGNRRFRPLQHQACKAFVANRD
CFVLLPTGGGKSLCYQLPAILKPGVTIVISPLLSLIQDQIVALNFKYGIPATFLNSQQKP
SQAAVVLQELRKEKPSCKLLYVTPEKVAGNMSFQEILKVLHRKGQLAGFVVDEAHCLSQW
GHDFRPDYRVLGCLKQNFPYVPVMALTATATPVVRKDIVNSLRIPQAMVLEASFDRPNLK
YEVIGKTKEPLKQLGNLLMDRFKNLCGIVYCLSKNECVEVSKFLKEKFKIKTVHYHAGLA
ARQRIAAQQKWHSGEAHVVCATIAFGMGIDKPDVRFVVHNTMSKSIESYYQESGRAGRDN
LSSKCILLYQRKDFSRIVCMLRSGQTGKRENFKLAMDQARKMQTYCELKDECRRQALLEH
FGESFDRNACRNGSNPCDNCLKLSS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacgatttggagttggagaaggcgagattgatcagcttagctctcgaattc
ggattcgacgaggactccgccaataactgcttggatcgccttgttcaactatatggtgat
gatgggcgagatttcatcactgtggagcactgtggtgatgactttcttgcatcacttgct
gaatttatgcaagagactgaagctgaggattgggatgatgtgcaagctatggaatcagaa
gcttgcggtgctttgactgagattctggacaaggatcttcccaagaattatgattcagag
gataaagaaaaaagaagcaaaattcatgtcatagaagattctcctgaatctcagaagcat
cataatgtgatgcatttagatacttcaagtgacagtgaagaggcaagctacaatatttcc
ggaaaacgattgaaatcttcctctagtattgctttaaatggaactggctgggacccctct
ccaagttcagtaaaacctccatcaatttctgcctatcgaaatgatccaactcgaagttca
ggttcatcagtttctcacgaaacatggaactccagtttatatgagaatagtggatctctc
acatatgacgagctgcaaaaactagatgattttgaattggcaaacattgttgtatttggt
aacagaagatttcgacccttgcagcatcaagcatgtaaagcatttgttgctaatcgtgat
tgttttgttcttttgcccactggaggtggtaaaagcctttgttaccagcttccagccatt
ttgaagccaggtgttacaattgttatatctccacttctttccctcattcaagatcagatt
gttgcactgaatttcaaatatggtataccagctacttttttaaattctcaacagaaacca
tcacaagcagcagtcgtgcttcaagaattaaggaaagaaaagccttcctgtaaacttctg
tatgtaactccagaaaaggttgctggaaatatgtcatttcaggagatcctaaaagttctg
cataggaagggacaattagcaggatttgttgttgatgaagctcactgtctgagccagtgg
ggccatgacttccgtccggattatagagtattaggatgcctcaaacagaactttccatat
gttcctgtgatggctttaactgccactgcaaccccagtagttcggaaggatattgtaaac
tcgttgcgaatcccccaagcaatggtgctagaggcaagttttgataggccaaacttgaag
tatgaagtgatagggaaaactaaagaaccgctcaaacagcttgggaatttactgatggat
cgtttcaaaaatttgtgtggaattgtatattgcctttcaaaaaatgaatgcgtggaggta
tcaaaatttctaaaggagaaattcaagatcaaaacagtgcattaccatgctggtttggct
gctcgtcagaggattgcggctcagcaaaaatggcatagtggagaagcccacgttgtttgt
gcaaccatagcttttgggatgggaatagacaaacctgatgttcgttttgttgttcacaac
accatgtccaaatcaatagagagttactatcaggaatctggaagggcaggacgagataat
ctatcttccaaatgcattcttctgtatcagaggaaggattttagtcggattgtatgcatg
cttaggagtggacaaactggtaaaagagaaaacttcaaacttgccatggatcaagcccgg
aaaatgcaaacatattgtgaactcaaggatgaatgccgtaggcaagctttactagaacac
tttggagaatccttcgatcgcaatgcctgcagaaatggctccaatccttgtgataactgt
ctcaagttatcttcatga
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