Salvia miltiorrhiza (redroot sage): 131009019
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Entry
131009019 CDS
T09291
Name
(RefSeq) pre-mRNA-splicing factor 38-like isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131009019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
131009019
Spliceosome [BR:
smil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131009019
Complex C
U4/U6.U5 tri-SnRNP related factors
131009019
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
131009019
NCBI-ProteinID:
XP_057792188
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Position
2:complement(72146367..72150423)
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AA seq
260 aa
AA seq
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MLVDKAMELDHLGGTHGGTRKPTPFMCLVMKMLQIQPDKEIVVEFIKNPEYKYVRVLGAF
YLRLTGMDVDVYRYLEPLYNDYRKLRLKLNDGKFTLTHVDEYIDELLTKDYSCDIALPRI
KKRWTLEGIGSLEPRRSALEDDFEEEEEKEEDDQLADGLDSTVNDKDYYRARSPTREKDR
DRKRDSHRNRFLCTGSVQLRSMMDRTIVLCKTNSKSIQCNFFPLLFLLHSISSCIAAVLV
KFGGCDSAKNLLVCIFLLSN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcgacaaggccatggagctcgaccacctcggcgggactcatggtggcacccgg
aaacccaccccttttatgtgccttgttatgaagatgctccagattcagcccgacaaggaa
atcgtcgtcgagttcataaaaaatcctgagtacaaatatgtccgtgtgcttggagctttt
tatttgcgtttaacgggaatggacgttgatgtttaccgttacttggaacctttatacaat
gattaccgaaagctgaggctcaagctaaatgatggaaaattcacattgacgcatgttgac
gagtacattgatgagctattgacaaaagattactcatgtgatattgcactaccacgaatc
aaaaaaagatggacgcttgaaggaattggttctcttgagcctcgaagaagtgctcttgaa
gatgattttgaagaagaagaggaaaaagaggaagatgaccaacttgcagatggattagat
tctactgtcaatgacaaggattactaccgggcacgaagtccaactagggaaaaagatcga
gacaggaaacgtgacagtcacagaaacaggtttctctgcactggcagtgtgcagctgaga
agtatgatggatcgtacaattgtactctgtaaaacaaacagtaaaagtattcagtgtaat
tttttccctttgcttttcttgttgcactccatctccagttgtattgctgctgtacttgta
aaatttggaggttgtgacagtgcaaagaacttgcttgtgtgtatttttttgttatccaat
tga
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